PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1237160.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 607aa MW: 66824.7 Da PI: 7.1734

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1237160.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36	1.3e-11	71	117	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h Er RR+++++ f+ L llP++ K K++i+ +Av+YIksL+ Pd.00g1237160.m01 71 HTWTERERRKKMRDMFSSLHALLPQL----PAKAYKSTIVDEAVRYIKSLE 117 5567*******************6....399**************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 607 aa Download sequence
MSCLQQNSVL GFPNSNLGTC GGGELLKLEK MGVNVNSYLN SSSALMEKGV IKESSGKAAS 60 GGGNESEHGI HTWTERERRK KMRDMFSSLH ALLPQLPAKA YKSTIVDEAV RYIKSLEKTL 120 QTKQKQKLDK LQRQSTSALI ASNTELAGET REAFLADHLH PSKNLMVTNA FPASLSPACF 180 ETWFSPTVVV NICGPDAQFS VCSPRKPGLL TTILYILEKH ELDVVSAHIS SDQYRCMYMI 240 HAHAGGACDH FPEALPVEDT FKLAAGAAIV LVLFLISLWF TSRRNSSSSK AKTFNQNSTI 300 PNVSKEIQEI RIDHARNPVP DPNPIQHQNH PDPVADSEPL ARAQALLLQP EDHDSPAGGG 360 GRQRIHIEIG KDHRISYPEK GGGSSHGSGE ARSGDQGLMA VPEVSHLGWG HWYTLRELED 420 ATNGFSDENV IGEGGYGIVY RGIFEDNHMV AVKNLLNNKG QAEKEFKVEV EAIGRVRHKN 480 LVRLLGYCAE GAHRMLVYEY VDNGNLEQWL HGDVGPTSPL TWEIRMNIIL GTAKGLTYLH 540 EGLEPKVVHR DIKSSNILLD KQWNSKVSDF GLAKLLGSER SYVTTRVMGT FGYVAPEYAS 600 TAALKER

Sequence ? help Back to Top

Protein Sequence Length: 607 aa Download sequence

MSCLQQNSVL GFPNSNLGTC GGGELLKLEK MGVNVNSYLN SSSALMEKGV IKESSGKAAS  60
GGGNESEHGI HTWTERERRK KMRDMFSSLH ALLPQLPAKA YKSTIVDEAV RYIKSLEKTL  120
QTKQKQKLDK LQRQSTSALI ASNTELAGET REAFLADHLH PSKNLMVTNA FPASLSPACF  180
ETWFSPTVVV NICGPDAQFS VCSPRKPGLL TTILYILEKH ELDVVSAHIS SDQYRCMYMI  240
HAHAGGACDH FPEALPVEDT FKLAAGAAIV LVLFLISLWF TSRRNSSSSK AKTFNQNSTI  300
PNVSKEIQEI RIDHARNPVP DPNPIQHQNH PDPVADSEPL ARAQALLLQP EDHDSPAGGG  360
GRQRIHIEIG KDHRISYPEK GGGSSHGSGE ARSGDQGLMA VPEVSHLGWG HWYTLRELED  420
ATNGFSDENV IGEGGYGIVY RGIFEDNHMV AVKNLLNNKG QAEKEFKVEV EAIGRVRHKN  480
LVRLLGYCAE GAHRMLVYEY VDNGNLEQWL HGDVGPTSPL TWEIRMNIIL GTAKGLTYLH  540
EGLEPKVVHR DIKSSNILLD KQWNSKVSDF GLAKLLGSER SYVTTRVMGT FGYVAPEYAS  600
TAALKER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49770.1	5e-37	bHLH family protein