PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1237000.m03

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bZIP

Protein Properties

Length: 618aa MW: 66960.6 Da PI: 9.6133

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1237000.m03	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	22	3.6e-07	592	612	5	25
CHHHCHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKk 25 +r+rr++kNRe+A rsR+RK+ Pd.00g1237000.m03 592 RRQRRMIKNRESAARSRARKQ 612 79******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 618 aa Download sequence
MASLSRSPPL VHHQINSLTL NPCPVTLSFP FLKTTALQAR LCALKTGADG GSRTGRPGTQ 60 GPDPGVLRKP VVSSGKDMDA ISDEDEGEDG KWVDWEDKIL EDTVPLVGFV RMILHSGKYE 120 SGDRLSPEHE KTVLERLLPF HPEAQKKIGS GIDYITVGYH PDFESSRCLF IVQKDGTLVD 180 FSYWKCIKGL IRKNYPLYAD SFILRHFRKR RRVLIVRLNV QKVAVVDIEN SFKVERCTCY 240 NETTKEDFTK MGTNMNFKGF GNEPPGINPL ARQSSIYSLT FEELQNTIGG SGKDFGSMNM 300 DELLKSIWTA EETQIMAPSG GGAGGQNGLG LGGGSLQRQG SLTLPRTLSQ KTVDEVWKNI 360 SKEGTGAGGS NMPQRQQTLG EMTLEEFLVK AGVVREEAQL APKPANNGAG FFGDLSRFGN 420 TGGNLDFEFQ QTNRGVGVMG NRVSETNSQV PNQASNLPLN ANGVRSNQQQ QQLPQQQQIF 480 PKQQPVTYNT SPLPMGPNAQ LGSPGMRGGI MGIGDQGLNG TLVQSSGMGM VGLGAAGAVR 540 VATGSPANQL SSDGIGKSNG TDTSSVSPVP YVFNGGFRGR KGGGPVEKVV ERRQRRMIKN 600 RESAARSRAR KQIHAGEW

Sequence ? help Back to Top

Protein Sequence Length: 618 aa Download sequence

MASLSRSPPL VHHQINSLTL NPCPVTLSFP FLKTTALQAR LCALKTGADG GSRTGRPGTQ  60
GPDPGVLRKP VVSSGKDMDA ISDEDEGEDG KWVDWEDKIL EDTVPLVGFV RMILHSGKYE  120
SGDRLSPEHE KTVLERLLPF HPEAQKKIGS GIDYITVGYH PDFESSRCLF IVQKDGTLVD  180
FSYWKCIKGL IRKNYPLYAD SFILRHFRKR RRVLIVRLNV QKVAVVDIEN SFKVERCTCY  240
NETTKEDFTK MGTNMNFKGF GNEPPGINPL ARQSSIYSLT FEELQNTIGG SGKDFGSMNM  300
DELLKSIWTA EETQIMAPSG GGAGGQNGLG LGGGSLQRQG SLTLPRTLSQ KTVDEVWKNI  360
SKEGTGAGGS NMPQRQQTLG EMTLEEFLVK AGVVREEAQL APKPANNGAG FFGDLSRFGN  420
TGGNLDFEFQ QTNRGVGVMG NRVSETNSQV PNQASNLPLN ANGVRSNQQQ QQLPQQQQIF  480
PKQQPVTYNT SPLPMGPNAQ LGSPGMRGGI MGIGDQGLNG TLVQSSGMGM VGLGAAGAVR  540
VATGSPANQL SSDGIGKSNG TDTSSVSPVP YVFNGGFRGR KGGGPVEKVV ERRQRRMIKN  600
RESAARSRAR KQIHAGEW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	208	212	RKRRR
2	209	213	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.2	2e-77	bZIP family protein