PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1235910.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HD-ZIP
Protein Properties Length: 884aa    MW: 97504.3 Da    PI: 6.4345
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1235910.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox24.35.1e-08991233757
                        C....TS-HHHHHHHHHHHHHHHHC CS
           Homeobox  37 l....gLterqVkvWFqNrRakekk 57 
                        +    +++ +q+kvWFqNrR +ek+
  Pd.00g1235910.m01  99 CpilsNIEPKQIKVWFQNRRCREKQ 123
                        455569*****************97 PP
2START1847.9e-582094172205
                        HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEE CS
              START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..gal 91 
                        +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s++++g a+ra+g+v  +++  v+e+l+d++ W ++++++++l+v+s+g  g++
  Pd.00g1235910.m01 209 IAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPT-RVAEILKDRPSWFRNCRSVDVLNVLSTGngGTI 299
                        7899******************************************************.8888888888*********************** PP

                        EEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHH CS
              START  92 qlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphw 179
                        +l +++l+a+++l+p Rdf+ +Ry+  l++g++v++++S++++q+ p+    +++vRae+lpSg+li+p+++g+s +++v+h+dl+ +++++
  Pd.00g1235910.m01 300 ELLYMQLYAPTTLAPaRDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSmppVQNFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPE 391
                        **********************************************9988899*************************************** PP

                        HHHHHHHHHHHHHHHHHHHHTXXXXX CS
              START 180 llrslvksglaegaktwvatlqrqce 205
                        +lr+l++s++  ++kt++a+l+++++
  Pd.00g1235910.m01 392 VLRPLYESSTLLAQKTTMAALRNLRQ 417
                        **********************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 884 aa     Download sequence    
MVKHEMRWGG GEEHVVKLRR SLHACGGHIY FGSTRVDHTQ ICNPLSFFLA SGHQAKLLSK  60
PKREEAYIGR DDGGDVSLQR WWDEDANGQW QVRKLIRECP ILSNIEPKQI KVWFQNRRCR  120
EKQRKEASRL QTVNRKLTAM NKLLMEENDR LQKQVSQLVY ENSYFRQQTQ NTNLATTDTS  180
CESVVTSGQH HLTPQHPPRD ASPAGLLSIA EETLAEFLSK ATGTAVEWVQ MPGMKPGPDS  240
IGIVAISHGC TGVAARACGL VGLEPTRVAE ILKDRPSWFR NCRSVDVLNV LSTGNGGTIE  300
LLYMQLYAPT TLAPARDFWL LRYTSVLEDG SLVVCERSLN NTQNGPSMPP VQNFVRAEML  360
PSGYLIRPCE GGGSIIHIVD HMDLEPWSVP EVLRPLYESS TLLAQKTTMA ALRNLRQISQ  420
EVSQPNAAGW GRRPAALRAL SQRLSKGFNE AVNGFTDEGW SILESDGVDD VTLLVNSSPG  480
KMMGANLYAN GVPSMSNAVL CAKASMLLQN VPPAILLRFL REHRSEWADR SIDAYSAAAI  540
KPGPCGLLGS RAGSFGDQVI HPLAHTIEHE EFMEVIKIEN MGHYREDMIM PAADIFLLQL  600
CSGVDENSVG TCAELVFAPI DASFSDDGPI LPSGFRIIPL DSRMDAPSPN RTLDLASALE  660
VGPAGSRASG DNAGHSGNTK SVMTIAFQFA FEIHLQDNVA SMARQYVRSI IASVQRVALA  720
LSPSRFGSNS GFRPPPGTPE AQTLAGWICQ SYRCYLGEDL LKSEGSESIL KSLWHHSDAI  780
LCCSLKALPV FTFANQAGLD MLETTLVALQ DITLEKIFDD NGRKTLFSEF PQIMQQGFMC  840
LQGGICMSSM GRPISYERAV AWKVLNEEET AHCICFMFIN WSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32880.10.0HD-ZIP family protein