PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1235750.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 239aa MW: 26432.3 Da PI: 4.9829 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.5 | 8.2e-19 | 67 | 117 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr + +g+Wv+eIr+p++ + r++lg+f t+e+Aa+a++ a+++++g Pd.00g1235750.m01 67 PVYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDVAALSIKG 117 68*****998.**********843...6***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MSSDQTQGSE TESSSNSFTS TTPPSSPSSL QNPLSVNLQK PNSPIHQEIE LPGKKNTKRG 60 RDSSKHPVYR GVRMRNWGKW VSEIREPRKK SRIWLGTFPT PEMAARAHDV AALSIKGNSA 120 ILNFPELSDS LPRPVSLAPR DVQAAASKAA QMHQFDANPS MSYNLSTESE ELSEIVELPS 180 LGYESTELRS EFVFVDPEDQ WVYPPPWLQR LGDCGGGYVC DELGTPSSSG FEGSLWEYN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11590.1 | 2e-73 | ERF family protein |