PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1234670.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 290aa    MW: 31921 Da    PI: 9.9836
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1234670.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.12.7e-31222279359
                        -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                        D+y+WrKYGqK++kgs++pr+YY+C++  gCp++k+ver+ +dp ++++tYegeH+h 
  Pd.00g1234670.m01 222 DEYSWRKYGQKPIKGSPYPRGYYKCSTVrGCPARKHVERAPDDPAMLIVTYEGEHRHA 279
                        9************************9888****************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MAVELMNFPK MEDQKAIQEA ASQGLKSMEH LIRFLSHQQQ TNQSSRLDCT DITDHTVSKF  60
KKVISLLNRT GHARFRRGPV QPDQPPHIMT LDFTRPNVFA SNPKSTEIEF AKESFSVSSS  120
SSFMSSAITG DGSVSNGKQG SSIFLAPAPT ASGAKPPLST APFKKRCHEH DHHSDDASCK  180
YSGSGSASGS GKCHCSKRRK NRVKKTIRVP AISSKIADIP PDEYSWRKYG QKPIKGSPYP  240
RGYYKCSTVR GCPARKHVER APDDPAMLIV TYEGEHRHAP ESVGLAFEST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.21e-117WRKY family protein