PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g123440.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 241aa MW: 27222.7 Da PI: 7.3223 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 47.2 | 4e-15 | 70 | 121 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++ +hn+ Er RR+++Ns ++ Lr+llP + ++kKls + ++ +YI +Lq Pd.00g123440.m01 70 KKLNHNASERDRRKKMNSLYSSLRSLLPAD---QGKKLSIPNTISHVLKYIPELQ 121 6789**************************...*******************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MLALSPPLFS TIAWPSEDLL SHEQNYFYRD SSTDQSAGSF LHILPSHHPQ VDLDRSTTIS 60 GDYSSITMEK KLNHNASERD RRKKMNSLYS SLRSLLPADQ GKKLSIPNTI SHVLKYIPEL 120 QKQVEGLIQN REELLSRACK QEAAMHEEKQ IKSTARSSLS AVSTYRLSDR AVAIQISTLK 180 THNNLLSAIL LNLEEEGLQV LNASSFQSSG GRVFYNIHLQ VERADRLECE NLSEKLMSFY 240 A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56970.1 | 5e-61 | bHLH family protein |