PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g123420.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 244aa MW: 27613.1 Da PI: 6.049 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 42.2 | 1.4e-13 | 72 | 123 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++ +hn+ Er RR++iNs ++ r+llP + ++kKls + ++ +YI +Lq Pd.00g123420.m01 72 KKLNHNASERDRRKKINSLYSSMRSLLPAD---QAKKLSIPNTISRVLKYIPELQ 123 6789**************************...*******************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MLALSPPVFS TVGWPSEDPI GYDQNYFYRD SSTDQTADSF LHILPSQLPQ FELDLSTTIS 60 GDNSSGSTVV AKKLNHNASE RDRRKKINSL YSSMRSLLPA DQAKKLSIPN TISRVLKYIP 120 ELQKQVEGLI RKREELLSRA SKQEDVMHEE KDIKNTAPSS SLSAVSTYRL SNREVAIQIS 180 TLKTHNNLLS EILLNLEEEG LQVLNASLLE SSGERVFYNL HLQVERSYRL ECENLSEKLM 240 SFYA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56970.1 | 3e-58 | bHLH family protein |