PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g123400.m02 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 245aa MW: 27989.6 Da PI: 6.5247 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 43.7 | 4.9e-14 | 74 | 124 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++ +hn+ Er RR++iNs ++ Lr+llP + + Kls + ++v+YI +Lq Pd.00g123400.m02 74 KKLNHNASERGRRQKINSLYSSLRSLLPAD----QMKLSIPNTISRVVKYIPELQ 124 6789*************************8....79****************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MLALSPPSFS TIGWPLEDPK SHDQNYFYRD SFTDQIAESF LHILPSQLPQ VEPARSTPST 60 TVSGEYSGVS TMVKKLNHNA SERGRRQKIN SLYSSLRSLL PADQMKLSIP NTISRVVKYI 120 PELQKQVEGL IRKREELLVR ISNQEDQELH EEKKMKSTAG SSLSAVSTYR LNDREVAIQI 180 STFKTHNNLL SEILLNLEEE GLQMLNASSF ESSGERVFYN LHLQVERSYR LECENLSEKL 240 MSFYA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 132 | 156 | RKREELLVRISNQEDQELHEEKKMK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56970.1 | 3e-58 | bHLH family protein |