PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g123390.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | SBP | ||||||||
Protein Properties | Length: 122aa MW: 13812.7 Da PI: 7.1778 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 27.6 | 7.4e-09 | 1 | 31 | 9 | 39 |
---TT--HHHHHTT--HHHHT-S-EEETTEE CS SBP 9 adlseakeyhrrhkvCevhskapvvlvsgle 39 +dls+ ++yh+rh vC++hsk+p+++v+g+e Pd.00g123390.m01 1 MDLSSSQDYHERHIVCDTHSKTPKAIVNGIE 31 59*************************9976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 122 aa Download sequence |
MDLSSSQDYH ERHIVCDTHS KTPKAIVNGI EVNVTTSEEK TVDEEPLVYA NKQEAKNAFK 60 ALLESANVHS DWTWEQVAWL FHSYYHHLLL LKSLLRAIPA ISPCQGRRGP KPQKCLPASQ 120 SC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27370.3 | 1e-09 | SBP family protein |