PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1232820.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 227aa    MW: 25183.1 Da    PI: 8.9642
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1232820.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.24.3e-18655255
                AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                       +++GVr++  +g+Wv+eIr+p        +r++lg+f tae Aa+a+++a+  ++g
  Pd.00g1232820.m01  6 KFRGVRQRQ-WGSWVSEIRHP-----LlkRRVWLGTFETAEAAARAYDQAAILMNG 55
                       89****999.**********8.....334**********************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MVQSRKFRGV RQRQWGSWVS EIRHPLLKRR VWLGTFETAE AAARAYDQAA ILMNGQNAKT  60
NFPTSNNNNN NNNSSGQDTK PTDQDSPWSP KALSELLNSK LRKCCKDPSP SLTCLRLDND  120
NSHIGVWQKR PAGSRASSNW VMRIELGKKK KHISDHHGSM CSSSSSSSPS SVSSSTSSSM  180
VGLIEAGMSE ADQDEEDKLA MQMIEELLNW NYPIPSTTSN VQEGNII
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11190.12e-65ERF family protein