PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1230950.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

CAMTA

Protein Properties

Length: 1080aa MW: 120825 Da PI: 6.0155

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1230950.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	175.6	6.5e-55	99	213	3	116
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenpt 93 +e ++rwlk+ e++ iL+n+ek++l+ e++++p+sgsl+L+n++++r+fr+DG++w+kkkdg+tv E+he+LKvg+ e+l+cyYah+e+np+ Pd.00g1230950.m01 99 QEaQTRWLKPAEVLYILQNHEKFKLAPEPPQQPSSGSLFLFNKRVLRFFRRDGHHWRKKKDGRTVGEAHERLKVGNAETLNCYYAHGEDNPN 190 5669************************************************************************************** PP CG-1 94 fqrrcywlLeeelekivlvhyle 116 fqrr+yw+L+ ++e+ivlvhy+e Pd.00g1230950.m01 191 FQRRSYWMLDPAYEHIVLVHYRE 213 *******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1080 aa Download sequence
MLNDENNPPF HSRKEPCPHL PIYSSASRYM PRLVLPKLSE LQPYTPRTTG SPVIRFSVVL 60 VDANEHKSNA FSAVRGQVLI FRQSLNMMQS GYNINDLFQE AQTRWLKPAE VLYILQNHEK 120 FKLAPEPPQQ PSSGSLFLFN KRVLRFFRRD GHHWRKKKDG RTVGEAHERL KVGNAETLNC 180 YYAHGEDNPN FQRRSYWMLD PAYEHIVLVH YREISEGKSS TGTFAQSPVS SSSFSHSPSD 240 KTTQNRGSIS MISDLHEPDQ NLSSPGSVEV NSDVAIKKNG RENPDKLYGT GESDSSAKFD 300 VSQALRRLEE QLSLNEDSFN EFVDDNPNSD IMDRFNEFLD DTNGSDILED HSDLTNQDQF 360 TAFHGPEYVV HDQFYGGRAQ MQGNANNSGE HSQFIGQEFA DRNKESAPWK EVLDSCKPSS 420 VVEPKEKCLY ELDTNEKLPS SFRSGPTEGQ EHCEWLDSDG TNVKNFSLSL PEEVDSFKLS 480 PCSSAMGTHS DYYTSLFEQG QTGTLDSDIS LTVAQKQKFT IREISPEWGY ATEATKVIIV 540 GSFLCDPSES AWSCMFGDVE VPAQIIQDGV LRCEAPPHLF GKVTICITSS NRVSCSEVRE 600 FEYRVKSSSG TNNWPPTETT KSAEELLLLV RFVQILMSDS SIQNRDSVEP ETLRRLKADD 660 DSWDSIIEAL LLGNGSASSN IYWLLEELLK DKLQQWLSSR SHGLDQTGCS LSKKEQGIIH 720 MVAGLGFEWA LNSILSCGVN INFRDINGWT ALHWAARFGR EKMVAVLVAS GASAGAVTDP 780 NSQDPIGKTP ASIAAISGHK GLAGYLSEVS LTSHLSSLTL EESELSKGSA EVEAEITVNS 840 ISNRSLQGNE DQASLKNTLA AVRNSAQAAA RIQSAFRAHS FRKRQQKEAG VSIDDYGISS 900 DDIQGLSAMS KLAFRNPRDY NSAAVSIQKK YRGWKGRKDF LALRQKVVKI QAHVRGYQVR 960 KHYKVICWAV AILDKVVLRW RRKGVGLRGF RHETQSSEES EDEDILKVFR KQKVDGAIEE 1020 AVSRVLSMVE SPKARQQYHR MLGRYHQAKA ELGGTSGEAD VPNSLDDTFN VEDIDMYQFP

Sequence ? help Back to Top

Protein Sequence Length: 1080 aa Download sequence

MLNDENNPPF HSRKEPCPHL PIYSSASRYM PRLVLPKLSE LQPYTPRTTG SPVIRFSVVL  60
VDANEHKSNA FSAVRGQVLI FRQSLNMMQS GYNINDLFQE AQTRWLKPAE VLYILQNHEK  120
FKLAPEPPQQ PSSGSLFLFN KRVLRFFRRD GHHWRKKKDG RTVGEAHERL KVGNAETLNC  180
YYAHGEDNPN FQRRSYWMLD PAYEHIVLVH YREISEGKSS TGTFAQSPVS SSSFSHSPSD  240
KTTQNRGSIS MISDLHEPDQ NLSSPGSVEV NSDVAIKKNG RENPDKLYGT GESDSSAKFD  300
VSQALRRLEE QLSLNEDSFN EFVDDNPNSD IMDRFNEFLD DTNGSDILED HSDLTNQDQF  360
TAFHGPEYVV HDQFYGGRAQ MQGNANNSGE HSQFIGQEFA DRNKESAPWK EVLDSCKPSS  420
VVEPKEKCLY ELDTNEKLPS SFRSGPTEGQ EHCEWLDSDG TNVKNFSLSL PEEVDSFKLS  480
PCSSAMGTHS DYYTSLFEQG QTGTLDSDIS LTVAQKQKFT IREISPEWGY ATEATKVIIV  540
GSFLCDPSES AWSCMFGDVE VPAQIIQDGV LRCEAPPHLF GKVTICITSS NRVSCSEVRE  600
FEYRVKSSSG TNNWPPTETT KSAEELLLLV RFVQILMSDS SIQNRDSVEP ETLRRLKADD  660
DSWDSIIEAL LLGNGSASSN IYWLLEELLK DKLQQWLSSR SHGLDQTGCS LSKKEQGIIH  720
MVAGLGFEWA LNSILSCGVN INFRDINGWT ALHWAARFGR EKMVAVLVAS GASAGAVTDP  780
NSQDPIGKTP ASIAAISGHK GLAGYLSEVS LTSHLSSLTL EESELSKGSA EVEAEITVNS  840
ISNRSLQGNE DQASLKNTLA AVRNSAQAAA RIQSAFRAHS FRKRQQKEAG VSIDDYGISS  900
DDIQGLSAMS KLAFRNPRDY NSAAVSIQKK YRGWKGRKDF LALRQKVVKI QAHVRGYQVR  960
KHYKVICWAV AILDKVVLRW RRKGVGLRGF RHETQSSEES EDEDILKVFR KQKVDGAIEE  1020
AVSRVLSMVE SPKARQQYHR MLGRYHQAKA ELGGTSGEAD VPNSLDDTFN VEDIDMYQFP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	0.0	CAMTA family protein