PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1230400.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 206aa    MW: 22421.6 Da    PI: 7.2466
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1230400.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.46.9e-1053100455
                        HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +h+ +Er RR++i  ++  L++l+P +    ++ + Ka +L k ++Y++ Lq
  Pd.00g1230400.m01  53 SHSLAERARREKISVRMKLLQSLVPGC----DQINGKAHVLDKIIKYVQLLQ 100
                        8*************************9....9*****************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MVSEEEGERK GKKQRKQNGS EAKKQSKVAA ASAEGVQRDG VRVKARRGEA TDSHSLAERA  60
RREKISVRMK LLQSLVPGCD QINGKAHVLD KIIKYVQLLQ NQVECLAAKL AFVDAMLYDD  120
CELNPSTNPC ASDQRLCCLE PPFPFVLEPP SSVQFRSLAD AAPPGTLACL LLTEDQKASL  180
IPQAQDGGSF EDIGKQPAGL DHSCTF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.24e-32bHLH family protein