PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1229050.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

CAMTA

Protein Properties

Length: 385aa MW: 43714.8 Da PI: 5.9463

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1229050.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	179.9	3.1e-56	41	157	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenpt 93 l+ k+rwl++ ei++iL n++k+++++e+++ p+ gsl+L++rk++ryfrkDG++w+kkkdgktv+E+he+LK g+v+vl+cyYah+een++ Pd.00g1229050.m01 41 LEAKHRWLRPAEICEILRNYKKFHISSEPASMPPGGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGEENEN 132 6679************************************************************************************** PP CG-1 94 fqrrcywlLeeelekivlvhylevk 118 fqrr+yw+Lee+l++ivlvhy+evk Pd.00g1229050.m01 133 FQRRSYWMLEEDLQHIVLVHYREVK 157 ********************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MYEIQVGSGC GISVTTTRIE FMADTKRYGL GNQLDIAQIL LEAKHRWLRP AEICEILRNY 60 KKFHISSEPA SMPPGGSLFL FDRKVLRYFR KDGHNWRKKK DGKTVKEAHE RLKAGSVDVL 120 HCYYAHGEEN ENFQRRSYWM LEEDLQHIVL VHYREVKGNR TNFNHTKGTE EAVPYSHETE 180 EIALNSEMEN SVSSSFDPNT FQMRSQATDT TSLSSAQASE FEDAESAYDH QASSQLQPFL 240 ELLQPKAEKI NAGFCDAFYP MSFSNNYQEK LSAIPGVNFG SLTQAYKRED GNVAGVSYEP 300 TKNLNSLLWE AALENSATGF QSLSFQPSFS ATHSDTMGII SKQENGMLGD LFTDSFEKKQ 360 MCESKPRVQQ GWQVWEVLPK SSNPT

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MYEIQVGSGC GISVTTTRIE FMADTKRYGL GNQLDIAQIL LEAKHRWLRP AEICEILRNY  60
KKFHISSEPA SMPPGGSLFL FDRKVLRYFR KDGHNWRKKK DGKTVKEAHE RLKAGSVDVL  120
HCYYAHGEEN ENFQRRSYWM LEEDLQHIVL VHYREVKGNR TNFNHTKGTE EAVPYSHETE  180
EIALNSEMEN SVSSSFDPNT FQMRSQATDT TSLSSAQASE FEDAESAYDH QASSQLQPFL  240
ELLQPKAEKI NAGFCDAFYP MSFSNNYQEK LSAIPGVNFG SLTQAYKRED GNVAGVSYEP  300
TKNLNSLLWE AALENSATGF QSLSFQPSFS ATHSDTMGII SKQENGMLGD LFTDSFEKKQ  360
MCESKPRVQQ GWQVWEVLPK SSNPT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	5e-99	CAMTA family protein