PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g122760.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 201aa    MW: 22449.5 Da    PI: 9.1617
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g122760.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2612.6e-19858256
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                       y+GVr+++ +g+WvAeIr p +   r r++lg+++tae Aa a+++a+ kl+ge
  Pd.00g122760.m01  8 LYRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTYDTAEAAAYAYDRAAYKLRGE 58
                      59******9.**********954...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MAPCKKKLYR GVRQRHWGKW VAEIRLPQNR MRVWLGTYDT AEAAAYAYDR AAYKLRGEYA  60
RLNFPNLKDP SKMGFGDCAR LNAVKTSVDA KIQAICQKVK RERAKKNAKK SSNSSENEKA  120
VMKVDSSPSS SGFGDGSGQE LVSLTATPTV SEDGVWRCEN SPPSISTEWP MGMAEDLEFE  180
GCSLARMPSY DPELIWEVLA N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.12e-39ERF family protein