PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g122720.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 309aa MW: 34182.4 Da PI: 8.4563 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60 | 5.4e-19 | 112 | 162 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr+++ +g+WvAeIr p + r r++lg+++tae Aa a+++a+ kl+ge Pd.00g122720.m01 112 LYRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTYDTAEAAAYAYDRAAYKLRGE 162 59******9.**********954...5**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 309 aa Download sequence |
MDTMQDSKLA FGFSDTIDIR SSLSNLILTS NTNTLDSIFS HCPQTLSTTT SNNSSVSEPL 60 GSSVYLHQRD LLQKFSDESR ANAAVSRFFQ KNPVQSSACS STTYMAPCKK KLYRGVRQRH 120 WGKWVAEIRL PQNRMRVWLG TYDTAEAAAY AYDRAAYKLR GEYARLNFPN LKDPSKMGFG 180 DCARLNAVKT SVDAKIQAIC QKVKRERAKK NAKKSSNSSE NEKAVMKVDS SPSSSGFGDG 240 SGQELVSLTA TATPTPTVSE DGVWRCENSP PSISTEWPMG MAEDLEFEGC SLARMPSYDP 300 ELIWEVLAN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G64380.1 | 2e-42 | ERF family protein |