PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1226130.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 354aa MW: 39287.4 Da PI: 8.0319

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1226130.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.9	1.1e-33	23	77	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl Pd.00g1226130.m01 23 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 77 79****************************************************8 PP
2	Myb_DNA-binding	72.6	6.1e-23	25	76	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ Pd.00g1226130.m01 25 RLRWTVELHERFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 76 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MNSHDRPMCV QGDSGLVLTT DPKPRLRWTV ELHERFVDAV TQLGGPDKAT PKTIMRVMGV 60 KGLTLYHLKS HLQKFRLGKQ PHKEFNDHSL KEHASPLDLQ RTSASSSAMI GRSMNEMQME 120 VQRRLHEQLE VQKHLQLRIE AQGKYMQSIL EKACQTLAGE NNMAAAAGSY KGNIGNQGVN 180 PADMGALKDF NSPLNFPSFQ DLNIYGGDHL DLQQNLDRPP LDHSFMPSND NSICLGPKKR 240 PSPYSGSGKS PLIWSDDLRL QDLGTAASCL GPQDDPFKSS DSIQIAPPSI ERGSEMDSIS 300 DIYESKPMIQ GEDKKFDSAN KLERPSPRRT PLGSDRMNPM INTGVRQGRN SPFG

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MNSHDRPMCV QGDSGLVLTT DPKPRLRWTV ELHERFVDAV TQLGGPDKAT PKTIMRVMGV  60
KGLTLYHLKS HLQKFRLGKQ PHKEFNDHSL KEHASPLDLQ RTSASSSAMI GRSMNEMQME  120
VQRRLHEQLE VQKHLQLRIE AQGKYMQSIL EKACQTLAGE NNMAAAAGSY KGNIGNQGVN  180
PADMGALKDF NSPLNFPSFQ DLNIYGGDHL DLQQNLDRPP LDHSFMPSND NSICLGPKKR  240
PSPYSGSGKS PLIWSDDLRL QDLGTAASCL GPQDDPFKSS DSIQIAPPSI ERGSEMDSIS  300
DIYESKPMIQ GEDKKFDSAN KLERPSPRRT PLGSDRMNPM INTGVRQGRN SPFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	1e-128	G2-like family protein