PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1223850.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 184aa    MW: 19646.8 Da    PI: 4.4182
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1223850.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.37e-171159255
                AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                        y+G+r ++  g+Wv+eIr+p++   +kr++lg+f tae+Aa+a++ a+++l+g
  Pd.00g1223850.m01 11 TYRGIR-CR-GGKWVSEIREPRK---TKRIWLGTFPTAEMAAAAYDVAALALKG 59
                       69***9.55.7*********843...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MASTSSGKHP TYRGIRCRGG KWVSEIREPR KTKRIWLGTF PTAEMAAAAY DVAALALKGA  60
DVALNFPGFI GSYPVPASTS AQDICSAAAA AAATLRKNDD SRESPGQRQK DDKDDVTVSN  120
SISLASSSVG DFMDEEELFG MPNLLMDMAE GMLVSPPRMN DSPPSDYDDS PGNSDGGESL  180
LWNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.12e-34ERF family protein