PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1223770.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 238aa MW: 26417.7 Da PI: 6.2893 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.2 | 1.8e-17 | 57 | 108 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ + +Wv+e r+p + k+ r++lg++ tae+Aa+a++ a+++++g Pd.00g1223770.m01 57 PVYRGVRRRN-NDKWVCEMREP---NkKKSRIWLGTYPTAEMAARAHDVAALAFRG 108 68*****887.8******9998...5477************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MSFSQLSDSV DQPESSSFSD ASVTTQGASC SDGDVILASS RPKKRAGRRV FKETRHPVYR 60 GVRRRNNDKW VCEMREPNKK KSRIWLGTYP TAEMAARAHD VAALAFRGKL ACINFADSAW 120 RLPLPASMDT MDIRRAAAEA AEGFRPAEFG GVCSGSSDEK ESMVVQVDEK NKKGSVNLER 180 SRSLSLSYWD EDEVFDMPRL LHDMAEGLLL SPSQCLGGYM NLDDMGTDAD VKLWSFSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51990.1 | 2e-57 | ERF family protein |