PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1223530.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 485aa MW: 54054.9 Da PI: 6.757 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 39.5 | 1e-12 | 305 | 351 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr+++P+ K++K++ L Av YI++L+ Pd.00g1223530.m01 305 NHVEAERQRREKLNHRFYVLRSVVPNV-----SKMDKSSLLADAVSYINQLK 351 699***********************6.....5*****************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 485 aa Download sequence |
MEEIISSCSS PNFGPESPAI FQQRLQFLVQ NRPECWVYSI FWRASKDSNG QVALSWGAGD 60 FQIDRDLASK TTNKVTNNYQ PKFGLTKKVT SREAEEALFD EDMVDLEMRL VDHGDVTGSE 120 WFYFYSVSLT QSFAAGHATN NILGRAFCSG GFVWLAGVHE LQFYECERVK EARMHGIQTL 180 VCIATSCGVL ELASVDVIKE DWGLIHLSIS LFGSDNNRVS QQGSRDGDVL LPPLESGMFL 240 GVQKELTRQE CGRKEVAPIN IGGSSAESPS DSIGNFTSEN IAKPRSKKRG RSSTNGASRE 300 SALLNHVEAE RQRREKLNHR FYVLRSVVPN VSKMDKSSLL ADAVSYINQL KAKVEELEAK 360 IQEQPPTPKT GSVSHLDHHL SQSSSSIVDS HHHHHSSYNN RTVVPVEVDV KIMGSEAIIR 420 VQCPDQDYPY ARLMNALKGL GLQVYHASIS SVKELMIQDV VARVPYGFNS DQEAMKTAIM 480 KRWHS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17880.1 | 2e-59 | bHLH family protein |