PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1223510.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 482aa MW: 54214.9 Da PI: 8.3789

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1223510.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.5	1.8e-11	307	353	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr+++P+ K++ ++ L Av YI++L+ Pd.00g1223510.m01 307 NHVEAERQRREKLNHRFYLLRSVVPNV-----SKMDRSSLLADAVAYINQLK 353 799*********************6.....5***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence
MEAIISSCSS PNFCQENLGT FQQRLQFIFQ NRPEWWVYSI FWQPSKDSND QVSLSWAAGD 60 FRVNSDLASK RNNKVTNNHQ PKFGFNKKVT RREAEEALFD EDMVDLEMRL VDDGDATGSE 120 WFYFYSVSLT QSFAAGHATN NILGRAFCSG GFVWLAGAHE LQFYECERVK DARMHGIQTL 180 VCIATPYGVL ELASLDVIKE DWGFVHLSKS LFGSDNNNNR VSQQKGGREG NVLAPLLENG 240 IFSGSQKKLT RQAGTKEAAR FNIGGSSPES LSGSVGNFTC QNTENTRSKK RRRSSNNGAS 300 RESSLLNHVE AERQRREKLN HRFYLLRSVV PNVSKMDRSS LLADAVAYIN QLKAKVEELE 360 LKTQAQPQNP KRVSVNNLDN QCSQSTSSIV DHHSSYNNTK VVPVEVDVKI MGSEAIIRVQ 420 CPDQDYPYAR LMNALKGLGL QVYHASISSV KELMIQDVVA RVPYGFTSEE AMRIGIIKRW 480 HN

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence

MEAIISSCSS PNFCQENLGT FQQRLQFIFQ NRPEWWVYSI FWQPSKDSND QVSLSWAAGD  60
FRVNSDLASK RNNKVTNNHQ PKFGFNKKVT RREAEEALFD EDMVDLEMRL VDDGDATGSE  120
WFYFYSVSLT QSFAAGHATN NILGRAFCSG GFVWLAGAHE LQFYECERVK DARMHGIQTL  180
VCIATPYGVL ELASLDVIKE DWGFVHLSKS LFGSDNNNNR VSQQKGGREG NVLAPLLENG  240
IFSGSQKKLT RQAGTKEAAR FNIGGSSPES LSGSVGNFTC QNTENTRSKK RRRSSNNGAS  300
RESSLLNHVE AERQRREKLN HRFYLLRSVV PNVSKMDRSS LLADAVAYIN QLKAKVEELE  360
LKTQAQPQNP KRVSVNNLDN QCSQSTSSIV DHHSSYNNTK VVPVEVDVKI MGSEAIIRVQ  420
CPDQDYPYAR LMNALKGLGL QVYHASISSV KELMIQDVVA RVPYGFTSEE AMRIGIIKRW  480
HN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	2e-59	bHLH family protein