PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1222300.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 352aa    MW: 39695.5 Da    PI: 4.865
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1222300.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP244.44e-14114159352
                AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkk 52 
                        ykGVr++k +g+++AeIrdp     +  r +lg+f taeeAa+ + + +++
  Pd.00g1222300.m01 114 YKGVRRRK-WGKYAAEIRDPI----QrCRKWLGTFATAEEAAAVYQKKKLE 159
                        9****998.**********83....359**************999877765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MPGFKTLVLN QHVKLSKLKT KQPNKEENTS SVKRIRIIYN DPDATDSSSD DEEYDGKEDR  60
LLHDKRFVSE ILVVDTKYEP SADVLSHCKT NGGKIGLSMN FYDCKKTKRS SSMYKGVRRR  120
KWGKYAAEIR DPIQRCRKWL GTFATAEEAA AVYQKKKLEF DSIQSLGKTQ RHYQNLQLSD  180
KDKGAFESFQ LTERTKHEFQ GIPLSEESQD SLGDADIETF SAEETKRVFC HPSPSSVLEI  240
SGTASLGIGL KQVKEESSVE VFGGEGSVQP FFEEDLSILK FPEEPMLPLD LGCGENYMFS  300
SLDQFFDGMS DIVDYPAFND GNGKAICLPT LDSDFGQQDF AWIDQNLNMA CP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1115121KGVRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.13e-25ERF family protein