PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1221720.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NF-YB
Protein Properties Length: 175aa    MW: 19693.6 Da    PI: 4.5026
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1221720.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB75.86.3e-2430112385
              NF-YB   3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkv 85 
                        ++d+ lP a +++i+k++lP + ++++da++++ ec +efi +++se+++ c re+++ti+++ +l al  lGf +y+e++  
  Pd.00g1221720.m01  30 KEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLISSESNEVCSREEKRTIAPEHVLKALQVLGFSEYIEEVYS 112
                        6899**************************************************************************98754 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MPLFVIFLQL GSSIVICFRM EPMDIIGKSK EDASLPKATM TKIIKEMLPP DVRVARDAQD  60
LLIECCVEFI NLISSESNEV CSREEKRTIA PEHVLKALQV LGFSEYIEEV YSAYEQHKLE  120
TMHDLAKSVK WGNGAEMTEE EALAEQQRMF AEARARMNGG ATAPKQPDPE QSLES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23090.22e-94NF-YB family protein