PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1221680.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 305aa    MW: 34419.3 Da    PI: 9.8915
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1221680.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.64.7e-164291255
                AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                       ++ GVr+++ +grWvAeI+d s   ++ r +lg+f+ aeeAa a+++a++ l+g
  Pd.00g1221680.m01 42 RFLGVRQRP-SGRWVAEIKDSS---QKLRLWLGTFDRAEEAALAYDKAARLLRG 91
                       577******.7*********42...36***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MDSLDSTKLP ADDQFQTQTF QENKERIRAM RKVNSNNISG KRFLGVRQRP SGRWVAEIKD  60
SSQKLRLWLG TFDRAEEAAL AYDKAARLLR GRNAKTNFPC HIMNTHEENC SILRKNPRLY  120
QLLQHAIMKN HAIARSSSTK INPWDRNQIR GIDFDTLVEE TIVCSSSGNT SGQDHEDRNK  180
LCALSFGSCK VYSSVVVAPS FSASSQTQCQ QAHEEKVISV LTVLAFLSCV LGRKLSRDQT  240
VLRPLESINP GHRISCAGWL KRKFRQLQCM VSHHDLEVGP NLKVIVDPKV KQGEEVPPPH  300
PPPQP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28370.12e-16ERF family protein