PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1221420.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 576aa MW: 63365.4 Da PI: 8.353

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1221420.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	56.4	5.2e-18	272	321	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN++f+ Lrel+P++ ++K +Ka+ L +++eYI+ Lq Pd.00g1221420.m01 272 RSKHSATEQRRRSKINDRFQILRELIPHS----DQKRDKASFLLEVIEYIQFLQ 321 889***********************9....9*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 576 aa Download sequence
MELPQPRPFG TEGRKPTHDF LSLYSHPTAQ QDPRPPSQGG YLETHDFLQP LERMGKKCIA 60 KEETSVEIST AEKPTSHAAA SAAAQPTSSV EHILPGGIGT YTISHISYFN QRVPKPEGSP 120 VFTVTQAQAS STDRNVEEHS NCSSYTGSGF TLWEESALKN KGKTGKENLG ERPVGIVRGQ 180 WTSSERPAQS SSNNYRNCFS AQSSGQKNIS FMEMMKSAAK GSTQEDEIDD EEEFVLKKET 240 STTTTTATTP YKGDLRVKVD VKSSDQKANT PRSKHSATEQ RRRSKINDRF QILRELIPHS 300 DQKRDKASFL LEVIEYIQFL QEKVNKYEGS YQGWNPDPAK LMPWRNNPNL RESYCDQSRG 360 MNGGSGTALV FAAKFDEKTT SVSPSIPGSC AQNPVESDTS TETTFKAMDH HPGITSKPMP 420 FPLSMQPNFF TPVRSGGAAV PQLPPRLPSD AENTSQHQSM LCHTVSRATD GAATRDKLKE 480 QELTIEDGRI NISSAYSQGL LNTLTQALQN SGVDLSQASI SVQIELGKRA NSRSPIPKSV 540 VKDNEILSSN QGKRHSRVVS GEDSEHAPKK LKTGRN

Sequence ? help Back to Top

Protein Sequence Length: 576 aa Download sequence

MELPQPRPFG TEGRKPTHDF LSLYSHPTAQ QDPRPPSQGG YLETHDFLQP LERMGKKCIA  60
KEETSVEIST AEKPTSHAAA SAAAQPTSSV EHILPGGIGT YTISHISYFN QRVPKPEGSP  120
VFTVTQAQAS STDRNVEEHS NCSSYTGSGF TLWEESALKN KGKTGKENLG ERPVGIVRGQ  180
WTSSERPAQS SSNNYRNCFS AQSSGQKNIS FMEMMKSAAK GSTQEDEIDD EEEFVLKKET  240
STTTTTATTP YKGDLRVKVD VKSSDQKANT PRSKHSATEQ RRRSKINDRF QILRELIPHS  300
DQKRDKASFL LEVIEYIQFL QEKVNKYEGS YQGWNPDPAK LMPWRNNPNL RESYCDQSRG  360
MNGGSGTALV FAAKFDEKTT SVSPSIPGSC AQNPVESDTS TETTFKAMDH HPGITSKPMP  420
FPLSMQPNFF TPVRSGGAAV PQLPPRLPSD AENTSQHQSM LCHTVSRATD GAATRDKLKE  480
QELTIEDGRI NISSAYSQGL LNTLTQALQN SGVDLSQASI SVQIELGKRA NSRSPIPKSV  540
VKDNEILSSN QGKRHSRVVS GEDSEHAPKK LKTGRN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.2	1e-136	bHLH family protein