PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1218890.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HSF

Protein Properties

Length: 387aa MW: 43889.9 Da PI: 7.9587

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1218890.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	103.5	1.8e-32	25	109	2	95
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkel 93 Fl+k+y++++d+++++++sw e++ +fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+k+ ++ weF+++ Fkkg+k+l Pd.00g1218890.m01 25 FLTKTYQLVDDPATDHIVSWGEDEATFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFANEFFKKGEKHL 107 9***************************************************************99.........***********98 PP XX CS HSF_DNA-bind 94 le 95 l Pd.00g1218890.m01 108 LY 109 85 PP
2	HSF_DNA-bind	113.9	1.1e-35	140	232	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkel 93 Fl+k+y++++d+++++++sw e++ +fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+k+ ++ weF+++ Fkkg+k+l Pd.00g1218890.m01 140 FLTKTYQLVDDPATDHIVSWGEDEATFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFANEFFKKGEKHL 222 9***************************************************************99.........*********** PP XXXXXXXXXX CS HSF_DNA-bind 94 lekikrkkse 103 l++i+r+k++ Pd.00g1218890.m01 223 LCEIHRRKTA 232 *****986 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
MALMMDNCEG ILLSLDSHKS VPAPFLTKTY QLVDDPATDH IVSWGEDEAT FVVWRPPEFA 60 RDLLPNYFKH NNFSSFVRQL NTYGFRKIVP DRWEFANEFF KKGEKHLLYL SLVKSMALMM 120 DNCEGILLSL DSHKSVPAPF LTKTYQLVDD PATDHIVSWG EDEATFVVWR PPEFARDLLP 180 NYFKHNNFSS FVRQLNTYGF RKIVPDRWEF ANEFFKKGEK HLLCEIHRRK TAQPHQNHVK 240 PVAPSNSYPS SLLLCNPPPN SMAPAATATK PSNFNQLLGY YPAPATNAKQ TPHMSTTTHH 300 HVMNSSSPSN TTSKSSSVTI LEDQQQPSSN GCKNTKLFGV PLLHSKKRLH PEEYGSNHGT 360 SMMEASKARL ILEKDDLGLH LMPPSAC

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

MALMMDNCEG ILLSLDSHKS VPAPFLTKTY QLVDDPATDH IVSWGEDEAT FVVWRPPEFA  60
RDLLPNYFKH NNFSSFVRQL NTYGFRKIVP DRWEFANEFF KKGEKHLLYL SLVKSMALMM  120
DNCEGILLSL DSHKSVPAPF LTKTYQLVDD PATDHIVSWG EDEATFVVWR PPEFARDLLP  180
NYFKHNNFSS FVRQLNTYGF RKIVPDRWEF ANEFFKKGEK HLLCEIHRRK TAQPHQNHVK  240
PVAPSNSYPS SLLLCNPPPN SMAPAATATK PSNFNQLLGY YPAPATNAKQ TPHMSTTTHH  300
HVMNSSSPSN TTSKSSSVTI LEDQQQPSSN GCKNTKLFGV PLLHSKKRLH PEEYGSNHGT  360
SMMEASKARL ILEKDDLGLH LMPPSAC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46264.1	1e-67	HSF family protein