PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1218760.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 682aa MW: 75596.4 Da PI: 7.5222

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1218760.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.6	8e-12	70	117	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h Er RR+++++ f+ L llP++ K K++i+ +Av+YIksL+ Pd.00g1218760.m01 70 MHTWTERERRKKMRDMFSSLHALLPQL----PAKAYKSTIVDEAVRYIKSLE 117 57788*******************6....399**************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 682 aa Download sequence
MSCLQQNSVL GSPNSNLGTC GGGELLKLEK MGVNVNSYLN SSSALMEKGV IKESSGKSAS 60 GGGNESEHGM HTWTERERRK KMRDMFSSLH ALLPQLPAKA YKSTIVDEAV RYIKSLEKTL 120 QTKQKQKLDK LQRQSTSALT ASNTELAGET REAFLADHLH PSKNLKVTNA FPASLSPACF 180 ETWFSPTVVV NICGPDAQFS VCSPRKPGLL TTILYILEKH ELDVVSAHIS SDQYRCMYMI 240 HAHAGGACDH FPEALSVEDT FKLAAGAAIV LVLFLISLWF TSRRNSSSSK AKTFNQNSTI 300 PNVSKEIQEI RIDHARNPVP DPNPVQHQNH PDPVADSEPL ARAQALLLQP EDHDSPAGGG 360 GRQRIHIEIG KDHRISYPEK GGGSSHGSGE ARSGDQGLMA VPEVSHLGWG HWYTLRELED 420 ATNGFADENV IGEGGYGIVY RGIFEDNHMV AVKNLLNNKG QAEKEFKVEV EAIGRVRHKN 480 LVRLLGYCAE GAHRMLVYEY VDNGNLEQWL HGDVGPTSPL TWEIRMNIIL GTAKGKELRD 540 NSCDGNIRIC SSRICYRPQG EVNLVEWLKA MVTNRTAEGV LDPRLPEKPS SRALKRALLV 600 ALRCVDPNVQ KRPKMGHVVH MLEADEFPFR DDRRAGREYG RSPRDASRMD KRMIESGDSS 660 GYESGAQTNQ SLWRKRELEE EH

Sequence ? help Back to Top

Protein Sequence Length: 682 aa Download sequence

MSCLQQNSVL GSPNSNLGTC GGGELLKLEK MGVNVNSYLN SSSALMEKGV IKESSGKSAS  60
GGGNESEHGM HTWTERERRK KMRDMFSSLH ALLPQLPAKA YKSTIVDEAV RYIKSLEKTL  120
QTKQKQKLDK LQRQSTSALT ASNTELAGET REAFLADHLH PSKNLKVTNA FPASLSPACF  180
ETWFSPTVVV NICGPDAQFS VCSPRKPGLL TTILYILEKH ELDVVSAHIS SDQYRCMYMI  240
HAHAGGACDH FPEALSVEDT FKLAAGAAIV LVLFLISLWF TSRRNSSSSK AKTFNQNSTI  300
PNVSKEIQEI RIDHARNPVP DPNPVQHQNH PDPVADSEPL ARAQALLLQP EDHDSPAGGG  360
GRQRIHIEIG KDHRISYPEK GGGSSHGSGE ARSGDQGLMA VPEVSHLGWG HWYTLRELED  420
ATNGFADENV IGEGGYGIVY RGIFEDNHMV AVKNLLNNKG QAEKEFKVEV EAIGRVRHKN  480
LVRLLGYCAE GAHRMLVYEY VDNGNLEQWL HGDVGPTSPL TWEIRMNIIL GTAKGKELRD  540
NSCDGNIRIC SSRICYRPQG EVNLVEWLKA MVTNRTAEGV LDPRLPEKPS SRALKRALLV  600
ALRCVDPNVQ KRPKMGHVVH MLEADEFPFR DDRRAGREYG RSPRDASRMD KRMIESGDSS  660
GYESGAQTNQ SLWRKRELEE EH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49770.1	5e-37	bHLH family protein