PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1218750.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 329aa    MW: 36167.5 Da    PI: 6.5751
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1218750.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH51.51.8e-16136182455
                        HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         hn+ E+rRR+riN+++  L+ l+P++      K +Ka++L +A+eY+k+Lq
  Pd.00g1218750.m01 136 VHNMSEKRRRSRINEKMKALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 182
                        6*************************7.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MADLYGTAPD SEEISNILSQ LLHGHGSSAS SSSSCMPFKP TYTHLLHSSV APHHVTTSSE  60
VLISETRHED YHRFARSEDR RVVDGYSAAA VVESSSGFDF TDSGGYFQAE GHDRSEVPLN  120
TAPPRSLSKR SRAAEVHNMS EKRRRSRINE KMKALQNLIP NSNKTDKASM LDEAIEYLKQ  180
LQLQVQMLTM KNGLSLHPMC LPGVMQPMQL PHMGLGLEEG SNKFPKSSRG ISPFYENEDN  240
PMQSAFNIPP GCAISNQPMV LPSVANVPTS EATFGFEPSI QALYRPFSVP SSSKELFRDG  300
EPQAKLDTSE TGKNSSSHVD ILSTKRPDV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.16e-45bHLH family protein