PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1217810.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 382aa    MW: 42318.5 Da    PI: 4.9094
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1217810.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.72.7e-103073471055
                        HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        r+RR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  Pd.00g1217810.m01 307 RKRRERINERLRILQNLVPNG-----TKVDISTMLEEAVHYVKFLQ 347
                        9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    
MESVGVFADG EWESLSRLFS TEEIEFTPHF LSQGSFPFQH NEGMNFEIPA SFCPNIPEAE  60
MGLSRVNESF FQHPSDALNS NVHYLSQESC YDNNNHGSAG IFTAILNQEN YYFGNSCHVP  120
VANDISASMD VYMNHHDHDG KSFGSFIPTF SDIVMEGSVS NKEDSGSDRL GFSDDSQPAA  180
IAIPGEELHL KRVHDVAEDK SNNDKSDSNP KKKPCLSKDV QKTKKNNARS KKGQKANSDV  240
KVKDEEESNT GADRQSTSSC SSEDDNGSQE TNGGETSDLK TSSALNSNGK TRANRGSATD  300
PQSLYARKRR ERINERLRIL QNLVPNGTKV DISTMLEEAV HYVKFLQLQI KLLSSDDMWM  360
YAPIAYNGMD IGLSLQKMSP LL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33880.14e-48bHLH family protein