PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1217280.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 433aa MW: 46590.5 Da PI: 5.9075

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1217280.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31.1	4.3e-10	274	322	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+el+P + +k Ka +L + ++Y++sLq Pd.00g1217280.m02 274 NSHSLAERVRREKISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 322 58************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
MGGHDSEDGG FQHRNEGSLN CPSSGMSTNP LPEKVSQMTM SSVSMFKPSN GADPFFGSGW 60 DPIVSLSQSD NFGGSSVVSH REFSNPPYPV ALENPGMSST SHLVQYPSDS SYVEMVPKLP 120 CFGSGSFSEM VGSFGLSEGA QIANPGCAAN YNPNREGGTE RTSTIGAQSH DDHQISEEGA 180 LGSSPNGKRR KRVPESNSAF SPNKNAEGEI NKDLSGESSD YLKEQDEKKA KGEDNTAANL 240 HGKQMGKQAK ESSQSGDPKD SYIHVRARRG QATNSHSLAE RVRREKISER MRLLQELVPG 300 CNKITGKAVM LDEIINYVQS LQQQVEFLSM KLATVNPELN IDIERILSKD ILNSRSGSGA 360 IFGFSHGISS SHPYPHGMFP GNLPSMPSSA PQFPSLPQTV LDSELQGLFH MGFDSSSAID 420 NLGQNAGRLK SEL

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

MGGHDSEDGG FQHRNEGSLN CPSSGMSTNP LPEKVSQMTM SSVSMFKPSN GADPFFGSGW  60
DPIVSLSQSD NFGGSSVVSH REFSNPPYPV ALENPGMSST SHLVQYPSDS SYVEMVPKLP  120
CFGSGSFSEM VGSFGLSEGA QIANPGCAAN YNPNREGGTE RTSTIGAQSH DDHQISEEGA  180
LGSSPNGKRR KRVPESNSAF SPNKNAEGEI NKDLSGESSD YLKEQDEKKA KGEDNTAANL  240
HGKQMGKQAK ESSQSGDPKD SYIHVRARRG QATNSHSLAE RVRREKISER MRLLQELVPG  300
CNKITGKAVM LDEIINYVQS LQQQVEFLSM KLATVNPELN IDIERILSKD ILNSRSGSGA  360
IFGFSHGISS SHPYPHGMFP GNLPSMPSSA PQFPSLPQTV LDSELQGLFH MGFDSSSAID  420
NLGQNAGRLK SEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10120.1	2e-92	bHLH family protein