PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1216520.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HSF | ||||||||
Protein Properties | Length: 363aa MW: 40526.2 Da PI: 4.6172 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 111 | 8.3e-35 | 42 | 133 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkel 93 Fl+k++e++ed++++ ++sws+ nsfvv+d+++f++++Lp+yFkh nf+SF+RQLn+YgF+kv+ ++ weF+++ F g+++l Pd.00g1216520.m01 42 FLTKTFEMVEDPSTDAIVSWSRARNSFVVWDSHKFSTTLLPRYFKHGNFSSFIRQLNTYGFRKVDPDR---------WEFANEGFLGGQRHL 124 9****************************************************************999.........*************** PP XXXXXXXXX CS HSF_DNA-bind 94 lekikrkks 102 l++ikr+++ Pd.00g1216520.m01 125 LKTIKRRRH 133 ******975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 363 aa Download sequence |
MDGVVVKEEE IVTCTVGSSS SSSSSFSPQP IEGLHEVGPP PFLTKTFEMV EDPSTDAIVS 60 WSRARNSFVV WDSHKFSTTL LPRYFKHGNF SSFIRQLNTY GFRKVDPDRW EFANEGFLGG 120 QRHLLKTIKR RRHVSQSMQQ EGGGGACVEL GQYGLETELE RLKRDRNVLM TEIVRLRQQQ 180 QNSKEQVMAM EGRLQTTEKK QQQIMAFLAK ALNSPSFIQN LVEKKARNKE LRGMEIGRKR 240 RLAASPSVEN LQEKPKTHVV DYSASQDQGE LETMESQIET FFSAAALDNE SSSDIIDPHS 300 SSVGGNLGIV NETTWEELWS DELIGGNPEE DVIVVGDESD IDVAVEDLVA EPADWGGPAD 360 GDL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 125 | 131 | LKTIKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26150.1 | 1e-123 | HSF family protein |