PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1216230.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 162aa    MW: 18776.5 Da    PI: 4.9695
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1216230.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY1017.1e-32102160159
                        ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                        ldDg++WrKYG+K+vk+s++pr+YY+C+ +gCpvkk+ver+++dp++v++tYeg Hnh 
  Pd.00g1216230.m01 102 LDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDRDDPRFVITTYEGIHNHM 160
                        59********************************************************6 PP

Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
MSNSNNFRAQ ESPENDFSDQ SNFEFSEYLM IGEWLDEDHP TSMVLETVQN SGYQANEVDE  60
SRGSSSQLGG SNSRENESGS VRERQEVRER VAFKTKSEVE ILDDGFKWRK YGKKMVKNSP  120
NPRNYYKCSV EGCPVKKRVE RDRDDPRFVI TTYEGIHNHM SL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26170.12e-49WRKY family protein