PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1214100.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 326aa MW: 35586.3 Da PI: 10.0728 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 99.7 | 1.8e-31 | 255 | 312 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp ++++tYegeHnh+ Pd.00g1214100.m01 255 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPAMLVVTYEGEHNHS 312 99************************988****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 326 aa Download sequence |
MAVDFMGYRN SSFSAKLEEN AVQEAASGLE SVEKLIRLLS QAQQNQHQDK YPSMVMDMDC 60 RAVADVAVSK FKKVISLLGR TRTGHARFRR APLTLTSGSS SSSQNQAQTQ ETFVKQAPLE 120 STKVYHATPI QQIPPPLHHH STVLESTKDS STTINFSYSA TTSFMSSLTG DSDSKQPLSS 180 SAFQITNMSQ VSSAGKPPLS SASLKRKCSS DNLGSGKCGA GSSGRCHCSK KRKLRLKRVV 240 RVPAISLKMA DIPPDDYSWR KYGQKPIKGS PHPRGYYKCS SVRGCPARKH VERALDDPAM 300 LVVTYEGEHN HSLSVAETSN LILESS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24240.1 | 1e-85 | WRKY family protein |