PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g1210910.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 392aa MW: 42772.2 Da PI: 6.6001 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.2 | 0.00027 | 358 | 380 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C++ F++ +L H++ H Pd.00g1210910.m01 358 YTCKICKREFPNYNSLGGHMSFH 380 9*******************988 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 392 aa Download sequence |
MDGQQDNAIP PFDEAWFDVA NPCGKEFELP NASSPIHPRW SDNSNNLVFL QDQQLHTPDI 60 LENSYELETI RPCAGNQVDS CPIMEMGTSI ANFVPIVNPQ EGTSIGNHKV HFPRSTGVLK 120 SEFEGAFPEV NQHVYAPTSA SYSWKGVDIN FPLRNQESHA VNSTNSPSIS STECLCLENN 180 PTHAPRFPNT SGFGPSVYIP PSKQLTHFCT SSNAFRLNSD DYIINDHVCS GFHFTILGLI 240 SSSGSSSSFG SSGCCPVRNQ EIRSSSFTYS PSLQNGLSVR SNQEAYKFGG SANGDINHGP 300 SHLQAVSHGT GITSNVPVPV ENQVETSTRV PQSNCHGSEN NQTFGPSSSK NGRCDVKYTC 360 KICKREFPNY NSLGGHMSFH AKMKKAKRKL DS |