PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1210140.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 229aa    MW: 25628.3 Da    PI: 5.2186
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1210140.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.76e-1892142255
                AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                         y+GVr+++ +g+++AeIrd +    +  r++lg+f++ae Aa a+++a+ +++g
  Pd.00g1210140.m01  92 SYRGVRRRP-WGKFAAEIRDSTR---HgIRVWLGTFDSAEAAALAYDQAAFSMRG 142
                        69*******.**********422...25*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MNYSIFHSPI SDLSPESSFG SSFSWDDHRF GNNSLPFNEN DSEEMLLYGL ISNATQEITS  60
RETETLSVSA NPIKEEEVSS TSDSENPKRE KSYRGVRRRP WGKFAAEIRD STRHGIRVWL  120
GTFDSAEAAA LAYDQAAFSM RGSSAILNFP VERVRESLKE INYVASDLNG SSPVVALKRK  180
HSMRRKIGTK KSKVERDVRI ENVVVFEDLG ADYLEELLNS SESTSATAT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.16e-65ERF family protein