PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1209560.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 202aa MW: 23589.2 Da PI: 10.142 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 22.4 | 2.2e-07 | 83 | 128 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 h +Er RR++ ++++ L ++lP+ a K +K i++++ I++Lq Pd.00g1209560.m01 83 HMLNERMRREKQKQSYMALHSMLPTgA------KSDKNWIVQMTAMNIQQLQ 128 6789*********************66......899999*****99999998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence |
MNMDQYILQA LEGEFLLNES LPVLNQRAFV PYTSRPITEK GLDKPPNSMN MNKRMVQFLR 60 KSWAPATARI VTGEDCRERG FRHMLNERMR REKQKQSYMA LHSMLPTGAK SDKNWIVQMT 120 AMNIQQLQRY KEELRKRNME VEAILAANEK ERVNWSKIRL RVANPTSGVD SMLEIGAAEI 180 EEALQETLYE AERKLRFSIP GR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43650.1 | 6e-28 | bHLH family protein |