PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g120430.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 396aa MW: 42718.4 Da PI: 6.0608 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31.3 | 3.8e-10 | 237 | 285 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+el+P + +k Ka +L + ++Y++sLq Pd.00g120430.m01 237 NSHSLAERVRREKISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 285 58**************************....999*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 396 aa Download sequence |
MTMSSVSMFK PSNGADPFFG SGWDPIVSLS QSDNFGGSSV VSHREFSNPP YPVALENPGM 60 SSTSHLVQYP SDSSYVEMVP KLPCFGSGSF SEMVGSFGLS ECAQIANPGC AANYNPNREG 120 GTERTSTIGA QSHDDHQISE EGALGSSPNG KRRKRVPESN SAFSPNKNAE GEINKDLSGE 180 SSDYLKEQDE KKAKGEDNTA ASLRGKQMGK QAKESSQSGD PKDSYIHVRA RRGQATNSHS 240 LAERVRREKI SERMRLLQEL VPGCNKITGK AVMLDEIINY VQSLQQQVEF LSMKLATVNP 300 ELNIDIERIL SKDILNSRSG SGAIFGFSPG ISSSHPYPHG MFPGNLPSMP SSAPQFPSLP 360 QTVLDSELQG LFHMGFDSSS AIDNLGQNAG RLKSEL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10120.1 | 1e-90 | bHLH family protein |