PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1203620.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GATA
Protein Properties Length: 285aa    MW: 30344.9 Da    PI: 5.1975
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1203620.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA498.6e-16193229135
               GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                        C +Cg ++  Tp++Rrgp g++tLCnaCGl+++ kg+
  Pd.00g1203620.m01 193 CMHCGISSksTPMMRRGPAGPRTLCNACGLKWANKGV 229
                        99***99889************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MYGSGGAPQS NQVEEQEDDV EESIDNPHIR FEDSSAIPPN PLYLTSSEYP PPAATNGGSD  60
QLTLSFQGEV YVFDEVSPDK VQAVLLLLGG YEIPSGIPSM GPVPLNQQGM NDLPVKPIQP  120
QRAASLSRFR EKRKERCFDK KIRYTVRKEV ALRMQRKKGQ FTSSKASSDD GGPASSGATQ  180
GSGQDESMQE TSCMHCGISS KSTPMMRRGP AGPRTLCNAC GLKWANKGVL TGGPKVSSIG  240
MQDPSAKGIE QGDGEAKDSV AVTMGANIAP TSNGDNSAMT VDRNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51600.25e-68GATA family protein