PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1202200.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TCP

Protein Properties

Length: 330aa MW: 36108.1 Da PI: 6.9728

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1202200.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	115.4	7.6e-36	56	191	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt............................ 65 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak +i++l+++ Pd.00g1202200.m01 56 TGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSSIDKLAELppwhpitgvaannaepdqsnpnemviag 147 79**************************************************************8877777666655554322222222222 PP TCP 66 ...ssssaseceaesssssasnsssg.....................................k 89 + + + + Pd.00g1202200.m01 148 gaeE----------T----------EssgynfhqlqrqmaatssinfqsypadhdlisrttnlN 191 1110..........1..........111112222222222233333444444444444444443 PP

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence
MSHLLPDQTL PPLTDVFTAL IVIGQGFIGV RNLEIAMAEF LGLAAAATGG HIVRSTGRKD 60 RHSKVYTAKG PRDRRVRLSA HTAIQFYDVQ DRLGYDRPSK AVDWLIKKAK SSIDKLAELP 120 PWHPITGVAA NNAEPDQSNP NEMVIAGGAE ETESSGYNFH QLQRQMAATS SINFQSYPAD 180 HDLISRTTNL NPCQDLGLSL HSFQDQGLNI HHTHSQQSQG DTNHNNDQIQ TLFAAGAGGS 240 TVGFDTSYQR MVAWSNQNRG GDGGFVFNSH SQALPQQAYA HAQGGTLQSS FSPSIDHHPL 300 PLPIPPTIDW ITNSIFGVSN WETRRKIQSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	1e-46	TCP family protein