PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1202150.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TCP

Protein Properties

Length: 369aa MW: 40284.4 Da PI: 6.6132

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1202150.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	115.2	8.5e-36	58	174	2	102
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..................ssssasecea 75 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak +i++l+++ s ++ Pd.00g1202150.m01 58 TGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSSIDKLAELppwhpitgvaannaepdqS-------NP 142 79**************************************************************7777776665544443220.......11 PP TCP 76 esssssasnsssg................kaaksaakskksqk 102 ++ ++ + + ++++++ Pd.00g1202150.m01 143 NE----------MviaggaeetessgynfHQLQRQ-MGENNNN 174 11..........12222222222222222111111.1111111 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MCNSHQLPDQ TLPPLTDVFT ALIVIGQGFI GVRNLEIAMA EFLGLAAAAT GGHIVRSTGR 60 KDRHSKVYTA KGPRDRRVRL SAHTAIQFYD VQDRLGYDRP SKAVDWLIKK AKSSIDKLAE 120 LPPWHPITGV AANNAEPDQS NPNEMVIAGG AEETESSGYN FHQLQRQMGE NNNNQANNVS 180 SFNIPPSLDS DTIADTMKSF FPTSSAATSS INFQSYPADH DLISRTTNLN PCQDLGLSLH 240 SFQDQGLNIH HTHSQQSQGD TNHNNDQIQT LFAAGAGGST VGFDTSYQRM VAWSNQNRGG 300 DGGFVFNSHS QALPQQAYAH AQGGTLQSSF SPSIDHHPLP LPIPPTIDWI TNSIFGVSNW 360 ETRRKIQSN

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MCNSHQLPDQ TLPPLTDVFT ALIVIGQGFI GVRNLEIAMA EFLGLAAAAT GGHIVRSTGR  60
KDRHSKVYTA KGPRDRRVRL SAHTAIQFYD VQDRLGYDRP SKAVDWLIKK AKSSIDKLAE  120
LPPWHPITGV AANNAEPDQS NPNEMVIAGG AEETESSGYN FHQLQRQMGE NNNNQANNVS  180
SFNIPPSLDS DTIADTMKSF FPTSSAATSS INFQSYPADH DLISRTTNLN PCQDLGLSLH  240
SFQDQGLNIH HTHSQQSQGD TNHNNDQIQT LFAAGAGGST VGFDTSYQRM VAWSNQNRGG  300
DGGFVFNSHS QALPQQAYAH AQGGTLQSSF SPSIDHHPLP LPIPPTIDWI TNSIFGVSNW  360
ETRRKIQSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	7e-52	TCP family protein