PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1200580.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 449aa MW: 48730.7 Da PI: 5.9223 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 92.2 | 3.9e-29 | 113 | 170 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +Dgy+WrKYGqK vkg+ + rsYYrCt+++Cpvk++ver++ ++++++++Y geH+h+k Pd.00g1200580.m01 113 EDGYHWRKYGQKLVKGNAYVRSYYRCTHPKCPVKRQVERTH-NGQITDTVYFGEHQHPK 170 8***************************************9.***************85 PP | |||||||
2 | WRKY | 104.1 | 7.5e-33 | 245 | 303 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK vkg+++prsYYrC+ +gCpvkk+ver+++d kvv+ tYeg+H+h+ Pd.00g1200580.m01 245 VNDGYRWRKYGQKLVKGNPNPRSYYRCSNPGCPVKKHVERASHDSKVVIATYEGQHDHD 303 58********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 449 aa Download sequence |
MISLGEPGTD KIASDIVPKK ESSNSEIHAP HQTPDNGICP LQSDHRGNVQ SLIPEKSLQL 60 PDGVGTASQS NQEGSVTSLT SEKAPQTPET SALVLRSGQE GSSPSTARER GLEDGYHWRK 120 YGQKLVKGNA YVRSYYRCTH PKCPVKRQVE RTHNGQITDT VYFGEHQHPK AQVNVPVAVS 180 FLVSIVEERP EELLLTGVEG KSSDVHGHTS NQIEPVDPSQ LSTVADNEAG EPRVVVQTMS 240 EADIVNDGYR WRKYGQKLVK GNPNPRSYYR CSNPGCPVKK HVERASHDSK VVIATYEGQH 300 DHDMPPTRTV THNAAASNVI TTARNGESGT TSEGNAVCHD TSPEHEDKPN KQLNVEPRTK 360 SSDVAGCDMV VDSDLGPERK LNEQVVGKAC TTEESDAPDI IVPRANELQN GESGIKSEGN 420 NACIDTVVHG NLCPESNSPE QKNPKAEPV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G04880.2 | 2e-84 | WRKY family protein |