PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1199180.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 689aa MW: 78665.1 Da PI: 6.0418

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1199180.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	85.4	9e-27	136	238	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk............tekerrtraetrtgCkaklkvkkekdgkwevtk 80 +fY+eYA+++GF++ +++s++sk+++e+++++f Cs++g+++e +k+ e++ +r+ ++t+Cka+++vk++ dgkw++++ Pd.00g1199180.m01 136 SFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSynrprarqnkqdPENATGRRSCSKTDCKASMHVKRRPDGKWVIHN 227 5****************************************99999999988776554555559999******************* PP FAR1 81 leleHnHelap 91 +++eHnHel p Pd.00g1199180.m01 228 FVKEHNHELLP 238 ******975 PP

Sequence ? help Back to Top
Protein Sequence Length: 689 aa Download sequence
MLEEEDVIIF LTLTRLDNLV GSVSYIVLQT SKMIFSDNNQ LKLNNLTMDI DLRLPSGEPD 60 KEDEEPHGID NMLEHEEKLQ NGDIENGNIV DVRDEVHAED GGDLNSPTAD MVVFKEDTNL 120 EPLFGMEFAS HGEAYSFYQE YARSMGFNTA IQNSRRSKTS REFIDAKFAC SRYGTKREYD 180 KSYNRPRARQ NKQDPENATG RRSCSKTDCK ASMHVKRRPD GKWVIHNFVK EHNHELLPAQ 240 AVSEQTRKMS STNEEFEKRW WKILEKFELK DDEWTQSLYE DRKQWVPTYM RDVCLAGMSA 300 VQRSESVNSF FDKYVHKKTT VQEFLKQYEA ILQDRYEEEA KADSDTWNKQ PTLRSPSPLE 360 KSVSGVYTHA VFKKFQVEVL GAVACHPKRE GQDETTITFR VQDFEKNQDF IVTWNEMKTE 420 VSCLCCLFEY KGYLCRHALI VLQICGLSAI PAQYILKRWT KDVKNRHLVG EESDHGLSRV 480 QKFNDLCQRA MKVIEEGSLS QESYSVACRA LEEAFGNCVS VNNSSKSLIE AGTSSVTHGL 540 LCIEDDSQNR SMGKTNKKKN PTKKRKVNSE PDVMTVGAQD SLQQMDKLNP RAVTLDGYYG 600 APQSVQGMVQ LNLMAPTRDN YYGNQQTIQG LGQLNSIAPS HDGYYSAQQS MHGLGQMDFF 660 RTAGGFTYGM RDDPNVRTAP LHDDASRHA

Sequence ? help Back to Top

Protein Sequence Length: 689 aa Download sequence

MLEEEDVIIF LTLTRLDNLV GSVSYIVLQT SKMIFSDNNQ LKLNNLTMDI DLRLPSGEPD  60
KEDEEPHGID NMLEHEEKLQ NGDIENGNIV DVRDEVHAED GGDLNSPTAD MVVFKEDTNL  120
EPLFGMEFAS HGEAYSFYQE YARSMGFNTA IQNSRRSKTS REFIDAKFAC SRYGTKREYD  180
KSYNRPRARQ NKQDPENATG RRSCSKTDCK ASMHVKRRPD GKWVIHNFVK EHNHELLPAQ  240
AVSEQTRKMS STNEEFEKRW WKILEKFELK DDEWTQSLYE DRKQWVPTYM RDVCLAGMSA  300
VQRSESVNSF FDKYVHKKTT VQEFLKQYEA ILQDRYEEEA KADSDTWNKQ PTLRSPSPLE  360
KSVSGVYTHA VFKKFQVEVL GAVACHPKRE GQDETTITFR VQDFEKNQDF IVTWNEMKTE  420
VSCLCCLFEY KGYLCRHALI VLQICGLSAI PAQYILKRWT KDVKNRHLVG EESDHGLSRV  480
QKFNDLCQRA MKVIEEGSLS QESYSVACRA LEEAFGNCVS VNNSSKSLIE AGTSSVTHGL  540
LCIEDDSQNR SMGKTNKKKN PTKKRKVNSE PDVMTVGAQD SLQQMDKLNP RAVTLDGYYG  600
APQSVQGMVQ LNLMAPTRDN YYGNQQTIQG LGQLNSIAPS HDGYYSAQQS MHGLGQMDFF  660
RTAGGFTYGM RDDPNVRTAP LHDDASRHA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22170.2	0.0	FAR1 family protein