PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1199170.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 423aa MW: 47750 Da PI: 6.7626

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1199170.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	89.8	3.7e-28	73	160	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+eYAk++GF++++++s++sk+++e+++++f Cs++g + e+++ ++r+ ++++t+Cka+++vk++ dgkw ++++ +eHnHel p Pd.00g1199170.m01 73 SFYQEYAKSMGFTTSIKNSRRSKKSKEFIDAKFACSRYGVTPESDSG---TSRRPTVKKTDCKASMHVKRRADGKWIIHEFIKEHNHELLP 160 5**************************************999888...7788889*****************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 423 aa Download sequence
MDRNQNLGET VVDGPENMNG GRVSENMNPV EEVQNRGGVV ISSPKRDIQV FEGDTDFEPC 60 NGIEFESHEA AYSFYQEYAK SMGFTTSIKN SRRSKKSKEF IDAKFACSRY GVTPESDSGT 120 SRRPTVKKTD CKASMHVKRR ADGKWIIHEF IKEHNHELLP ALAYHFRIHR NVKLAEKNNI 180 DILHAVSERT RKMYVEMSRQ SGGQSMVEET ERVQTRVQRY NDLCKRAIEL SEEGSVSEET 240 YNIAFRTLVE ALKNCVNVNN SNNTVVDFSG TVHSIREAEE ENQGSLASKT SRKKIANRKR 300 KVQAEQDVIL VEAQDSLQQM DNLSSDGIPL TGYYGAQQNV HGLVQLNLME PPHDSYYVNQ 360 QSMQGLGQLN SIAPNHDGFF GTQQSIHGLG HLDFRPSTSF SYSLQDDPHL RSSQLHGDAS 420 RHS

Sequence ? help Back to Top

Protein Sequence Length: 423 aa Download sequence

MDRNQNLGET VVDGPENMNG GRVSENMNPV EEVQNRGGVV ISSPKRDIQV FEGDTDFEPC  60
NGIEFESHEA AYSFYQEYAK SMGFTTSIKN SRRSKKSKEF IDAKFACSRY GVTPESDSGT  120
SRRPTVKKTD CKASMHVKRR ADGKWIIHEF IKEHNHELLP ALAYHFRIHR NVKLAEKNNI  180
DILHAVSERT RKMYVEMSRQ SGGQSMVEET ERVQTRVQRY NDLCKRAIEL SEEGSVSEET  240
YNIAFRTLVE ALKNCVNVNN SNNTVVDFSG TVHSIREAEE ENQGSLASKT SRKKIANRKR  300
KVQAEQDVIL VEAQDSLQQM DNLSSDGIPL TGYYGAQQNV HGLVQLNLME PPHDSYYVNQ  360
QSMQGLGQLN SIAPNHDGFF GTQQSIHGLG HLDFRPSTSF SYSLQDDPHL RSSQLHGDAS  420
RHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	2e-75	FAR1 family protein