PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1197900.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family SBP
Protein Properties Length: 508aa    MW: 56443.1 Da    PI: 7.9881
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1197900.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP132.81.1e-41163239177
                        --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS
                SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 
                        +Cqv gC++dls+ k+yh+rh+vC++hsk+p+v+v+g+eqrfCqqCsrfh l efD+ krsCrrrLa+hnerrrk+q
  Pd.00g1197900.m01 163 TCQVFGCNMDLSSSKDYHKRHRVCDAHSKTPKVIVNGMEQRFCQQCSRFHLLAEFDDVKRSCRRRLAGHNERRRKPQ 239
                        6**************************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 508 aa     Download sequence    
MESRSFGSEG KGFLFPEEID IQIDAFARSR KPLLEWDNKT CFNFGKESVD GMEFMELDLP  60
DIVRKPFHTN QGVEILSDVV GNDSSYNSVA SPTCLISSSS SLGEGESGSK FSSPVTESNS  120
QDSSLITLKL GRLTDSKNGQ NGQHSKDRSK RGGIKGSYSH IPTCQVFGCN MDLSSSKDYH  180
KRHRVCDAHS KTPKVIVNGM EQRFCQQCSR FHLLAEFDDV KRSCRRRLAG HNERRRKPQL  240
DTLNCKPHKL LRSYQGTGYV GTSFAKRTPF VFSDILPGGI LYPEEYAHAN QYGNVKCEDE  300
STYSHCVTPI ANRQMLPKSV LGKQHAPGIP SSGNEYSAFD AASTIQKASG SSNSGCALSL  360
LSTQSHNLSG HSAGVQVPSP SIIQQSTHHS VGQLYEKPSR VYSMEKCGQR GSYLRSMNSL  420
GVDQMESVID SSQAVDFQLH TDGGFQESHC LSTKNMENTT VSQLLKRHAV DNVIMLVEAV  480
WVFLHQQYSD YIGGFYTMAG KNFRYHWW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69170.13e-51SBP family protein