PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1197900.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | SBP | ||||||||
Protein Properties | Length: 508aa MW: 56443.1 Da PI: 7.9881 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 132.8 | 1.1e-41 | 163 | 239 | 1 | 77 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cqv gC++dls+ k+yh+rh+vC++hsk+p+v+v+g+eqrfCqqCsrfh l efD+ krsCrrrLa+hnerrrk+q Pd.00g1197900.m01 163 TCQVFGCNMDLSSSKDYHKRHRVCDAHSKTPKVIVNGMEQRFCQQCSRFHLLAEFDDVKRSCRRRLAGHNERRRKPQ 239 6**************************************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 508 aa Download sequence |
MESRSFGSEG KGFLFPEEID IQIDAFARSR KPLLEWDNKT CFNFGKESVD GMEFMELDLP 60 DIVRKPFHTN QGVEILSDVV GNDSSYNSVA SPTCLISSSS SLGEGESGSK FSSPVTESNS 120 QDSSLITLKL GRLTDSKNGQ NGQHSKDRSK RGGIKGSYSH IPTCQVFGCN MDLSSSKDYH 180 KRHRVCDAHS KTPKVIVNGM EQRFCQQCSR FHLLAEFDDV KRSCRRRLAG HNERRRKPQL 240 DTLNCKPHKL LRSYQGTGYV GTSFAKRTPF VFSDILPGGI LYPEEYAHAN QYGNVKCEDE 300 STYSHCVTPI ANRQMLPKSV LGKQHAPGIP SSGNEYSAFD AASTIQKASG SSNSGCALSL 360 LSTQSHNLSG HSAGVQVPSP SIIQQSTHHS VGQLYEKPSR VYSMEKCGQR GSYLRSMNSL 420 GVDQMESVID SSQAVDFQLH TDGGFQESHC LSTKNMENTT VSQLLKRHAV DNVIMLVEAV 480 WVFLHQQYSD YIGGFYTMAG KNFRYHWW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69170.1 | 3e-51 | SBP family protein |