PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1197650.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 335aa    MW: 36759.4 Da    PI: 6.0062
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1197650.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH50.15e-164594255
                       HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                       r +h+  E+rRR++iN++f+ Lr+l+P++    ++K + a+ L +++eY+++Lq
  Pd.00g1197650.m01 45 RSKHSVTEQRRRSKINERFQILRDLIPHS----DQKRDTASFLLEVIEYVQYLQ 94
                       899*************************9....8*******************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MRTAAKGNQE EDDYDDEEFG SRKEGPSSNS NSKDAKNNDK ASAIRSKHSV TEQRRRSKIN  60
ERFQILRDLI PHSDQKRDTA SFLLEVIEYV QYLQEKVHKY EGSYQGWSPE PTKLMPWRNS  120
HWRVQSFVGH PQAGKNDTGA VSPFPGKFDE NSISITPNML ATSTQNPVES DPSRDVASKI  180
MDRQPEIVNK AIPLPMPLPV NMTAPVRSDG ILAHPLQGPV SDAQSTQCPP TSASDALNQQ  240
EELTIDGGTI SISSVYSQGL LNSLNEALQS AGVDLSQASV SVQIDLGNRA NRGLSSGTPA  300
SKDHEIPHSS NQTVAHFRDA GSGEDSDQTH KRMKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.11e-110bHLH family protein