PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g1197650.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 335aa MW: 36759.4 Da PI: 6.0062 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 50.1 | 5e-16 | 45 | 94 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h+ E+rRR++iN++f+ Lr+l+P++ ++K + a+ L +++eY+++Lq Pd.00g1197650.m01 45 RSKHSVTEQRRRSKINERFQILRDLIPHS----DQKRDTASFLLEVIEYVQYLQ 94 899*************************9....8*******************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 335 aa Download sequence |
MRTAAKGNQE EDDYDDEEFG SRKEGPSSNS NSKDAKNNDK ASAIRSKHSV TEQRRRSKIN 60 ERFQILRDLI PHSDQKRDTA SFLLEVIEYV QYLQEKVHKY EGSYQGWSPE PTKLMPWRNS 120 HWRVQSFVGH PQAGKNDTGA VSPFPGKFDE NSISITPNML ATSTQNPVES DPSRDVASKI 180 MDRQPEIVNK AIPLPMPLPV NMTAPVRSDG ILAHPLQGPV SDAQSTQCPP TSASDALNQQ 240 EELTIDGGTI SISSVYSQGL LNSLNEALQS AGVDLSQASV SVQIDLGNRA NRGLSSGTPA 300 SKDHEIPHSS NQTVAHFRDA GSGEDSDQTH KRMKT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G69010.1 | 1e-110 | bHLH family protein |