PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1197460.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 543aa MW: 57792.3 Da PI: 5.676 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.3 | 6.7e-09 | 359 | 407 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq Pd.00g1197460.m01 359 NSHSLAERVRREKISERMKFLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 407 58*************************9....556*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 543 aa Download sequence |
MNYSPGLAPD WRFGGSNLTN TPVGLVSTGN SMAVSKGDLV GSSSRPSASM VDSFNPTLWD 60 HPTNSQDLGG FCDINGQTSA STSDTIGIRK GIPVSLRSGI DRPLEMCWNP PNSMMKGGIF 120 LPNGPGMLPQ SLSQFPADSA FIERAARFSC FNGGSFSDML NPFGVPESMS LYSRGGGMMH 180 WTPEVVAGNG SKAVSCAQSQ RNELNGGDAS RDVSLPIEHG TAEGSPLKNE KKSESLVKSH 240 DEAKHTVGGS GDESDEADFS GGAGQEEPSM LEGTGVEPSS KGSKKRKRSG QANELDQADA 300 QKPGESAQDA SEIQQKGEQH PASTTNKTTG KQSKQGSQAS DPPKEEYIHV RARRGQATNS 360 HSLAERVRRE KISERMKFLQ DLVPGCSKVT GKAVMLDEII NYVQSLQRQV EFLSMKLATV 420 NPRLDFNIEG LLTKDILQSR VGPSSTLGFS PDVPIAYPQL HPSQSGLIQA GLPGMGSPSD 480 ILRRAMSSQM TPMTGGFKEP SQLPNVWEDE LHNVVQMSYG AGTPTGSQDV DGSGTPGQMK 540 VEL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 284 | 289 | KKRKRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68920.1 | 1e-130 | bHLH family protein |