PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1197460.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 543aa    MW: 57792.3 Da    PI: 5.676
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1197460.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.36.7e-09359407355
                        HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +h+ +Er RR++i +++  L++l+P +    sk   Ka +L + ++Y++sLq
  Pd.00g1197460.m01 359 NSHSLAERVRREKISERMKFLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 407
                        58*************************9....556*****************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 543 aa     Download sequence    
MNYSPGLAPD WRFGGSNLTN TPVGLVSTGN SMAVSKGDLV GSSSRPSASM VDSFNPTLWD  60
HPTNSQDLGG FCDINGQTSA STSDTIGIRK GIPVSLRSGI DRPLEMCWNP PNSMMKGGIF  120
LPNGPGMLPQ SLSQFPADSA FIERAARFSC FNGGSFSDML NPFGVPESMS LYSRGGGMMH  180
WTPEVVAGNG SKAVSCAQSQ RNELNGGDAS RDVSLPIEHG TAEGSPLKNE KKSESLVKSH  240
DEAKHTVGGS GDESDEADFS GGAGQEEPSM LEGTGVEPSS KGSKKRKRSG QANELDQADA  300
QKPGESAQDA SEIQQKGEQH PASTTNKTTG KQSKQGSQAS DPPKEEYIHV RARRGQATNS  360
HSLAERVRRE KISERMKFLQ DLVPGCSKVT GKAVMLDEII NYVQSLQRQV EFLSMKLATV  420
NPRLDFNIEG LLTKDILQSR VGPSSTLGFS PDVPIAYPQL HPSQSGLIQA GLPGMGSPSD  480
ILRRAMSSQM TPMTGGFKEP SQLPNVWEDE LHNVVQMSYG AGTPTGSQDV DGSGTPGQMK  540
VEL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1284289KKRKRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.11e-130bHLH family protein