PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1196800.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Dof

Protein Properties

Length: 685aa MW: 77268.1 Da PI: 7.3553

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1196800.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	49.8	7.1e-16	16	63	11	58
zf-Dof 11 CdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrkn 58 stntkf y nn+ l P +Ck+CrryWt+G ++r+vPv g k+ Pd.00g1196800.m01 16 FCSTNTKFSYCNNHKLYPPCQYCKSCRRYWTQGDTFRDVPVCGNYHKK 63 4599*************************************9988775 PP

Sequence ? help Back to Top
Protein Sequence Length: 685 aa Download sequence
MSQLPSPQAK LQGTNFCSTN TKFSYCNNHK LYPPCQYCKS CRRYWTQGDT FRDVPVCGNY 60 HKKVGHIPHT PGSMAILGNP LLTHPGSDLI HDVDQEANGD QAELEAQAPM FKEYSLDELR 120 KATNGFSSEC IVSESGEKAP NVVYRGKLDN NRLVAVKRFS KQSWPDAQQF VVEAVGVGKL 180 RHKRLVNLVG CCAEGDERLL VAEYMPNDTL SKHLFHWDKK PLPWEMRVRV AYYIAQALDH 240 CNIENRKIYH DLNAYRVLFD EDGDPRLSTF GLMKNSRDGK SYSTNLAYTP PEFLRTGRVI 300 PESVIYSYGT VLLDLLSGKH IPPSHALDLI REKNVLLLMD SSLEGQYVND DATKLVELAS 360 KCLQSEARDR GDIKFLLTVV APLQKQKEAA SHVLMGLPRN TVVVPTMLSP LGKACARMDL 420 TAVHDILLKT SYKDEEGAEN ELSFQEWTQQ VQDMLNTKKF GDIAFRDKDF KNAIEYYSKL 480 VAMMSGPSAT VFARRAFSYL MNGQAELALR DAMQAQVCIP EWPTAFYLQA LALSKLGMET 540 DAQDMLNDGA AFEAKRHNTW RYVDSVNESI SRKSFAVISR TLNVVQIERY RKIESDRRTA 600 ARGKIQHFMD SRGACKEVSD ELARELLIAI SYPVPDQVRD LSFVPRDRVL VANGDGDEKY 660 VSELMTISNV QSPDIKNLKQ ASICN

Sequence ? help Back to Top

Protein Sequence Length: 685 aa Download sequence

MSQLPSPQAK LQGTNFCSTN TKFSYCNNHK LYPPCQYCKS CRRYWTQGDT FRDVPVCGNY  60
HKKVGHIPHT PGSMAILGNP LLTHPGSDLI HDVDQEANGD QAELEAQAPM FKEYSLDELR  120
KATNGFSSEC IVSESGEKAP NVVYRGKLDN NRLVAVKRFS KQSWPDAQQF VVEAVGVGKL  180
RHKRLVNLVG CCAEGDERLL VAEYMPNDTL SKHLFHWDKK PLPWEMRVRV AYYIAQALDH  240
CNIENRKIYH DLNAYRVLFD EDGDPRLSTF GLMKNSRDGK SYSTNLAYTP PEFLRTGRVI  300
PESVIYSYGT VLLDLLSGKH IPPSHALDLI REKNVLLLMD SSLEGQYVND DATKLVELAS  360
KCLQSEARDR GDIKFLLTVV APLQKQKEAA SHVLMGLPRN TVVVPTMLSP LGKACARMDL  420
TAVHDILLKT SYKDEEGAEN ELSFQEWTQQ VQDMLNTKKF GDIAFRDKDF KNAIEYYSKL  480
VAMMSGPSAT VFARRAFSYL MNGQAELALR DAMQAQVCIP EWPTAFYLQA LALSKLGMET  540
DAQDMLNDGA AFEAKRHNTW RYVDSVNESI SRKSFAVISR TLNVVQIERY RKIESDRRTA  600
ARGKIQHFMD SRGACKEVSD ELARELLIAI SYPVPDQVRD LSFVPRDRVL VANGDGDEKY  660
VSELMTISNV QSPDIKNLKQ ASICN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G47655.1	3e-14	Dof family protein