PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1196570.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Dof

Protein Properties

Length: 670aa MW: 75482.1 Da PI: 7.3899

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1196570.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	52.9	7.9e-17	16	63	11	58
zf-Dof 11 CdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrkn 58 stntkf y nn+ l+ P +Ck+C+ryWt+G ++r+vPv g rk+ Pd.00g1196570.m01 16 FCSTNTKFSYCNNHKLHPPCQYCKSCHRYWTQGNTFRDVPVCGNYRKK 63 4599******************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 670 aa Download sequence
MSHLPSPQAK LQGTNFCSTN TKFSYCNNHK LHPPCQYCKS CHRYWTQGNT FRDVPVCGNY 60 RKKVGHIPHT PGSMAILGNP LLTHPRSDLI HDVDQEANGD QAELEAQAPM FKEYSLDELR 120 KATNGFSSEC IVSESGEKAP NVVYRGKLDN NRLVAVKRFS KQPWPDAQQF VVEAVGVGKL 180 RHKRLVNLVG CCAEGDERLL VAEYMPNDTL SKHLFHWDKK PLPWEMRVRV AYYIAQALDH 240 CNIENRKIYH DLNAYRVLFD EDGDPRLSTF GLMKNSRDGK SYSTNLAYTP PEFLRTGRVI 300 PESVIYSYGT VLLDLLSGKH IPPSHALDLI REKNVLLLMD SSLEGQYVND DATKLVELAS 360 KCLQSEARDR GDIKFLLTVV APLQKQKEAA SHVLMGLPRN TVVVPTMLSP LGKACARMDL 420 TAVHDILLKT SYKDEEGAEN ELSFQEWTQQ VQDMLNTKKF GDIAFRDKDF KNAIEYYSKL 480 VAMMSGPSAT VFARRAFSYL MNGQAELALR DAMQAQVCIP EWPTAFYLQA LALSKLGMET 540 DAQDMLNDGA AFEAKRHNTW RYVDSVNESI SRKSFAVISR TLNVVPRGKI QHFMDSRGAC 600 KEVSDELARE LLIAISYPVP DQVRDLSFVP RDRVLVANGD GDEKYVSELM TISNVQSPDI 660 KNLKQASICN

Sequence ? help Back to Top

Protein Sequence Length: 670 aa Download sequence

MSHLPSPQAK LQGTNFCSTN TKFSYCNNHK LHPPCQYCKS CHRYWTQGNT FRDVPVCGNY  60
RKKVGHIPHT PGSMAILGNP LLTHPRSDLI HDVDQEANGD QAELEAQAPM FKEYSLDELR  120
KATNGFSSEC IVSESGEKAP NVVYRGKLDN NRLVAVKRFS KQPWPDAQQF VVEAVGVGKL  180
RHKRLVNLVG CCAEGDERLL VAEYMPNDTL SKHLFHWDKK PLPWEMRVRV AYYIAQALDH  240
CNIENRKIYH DLNAYRVLFD EDGDPRLSTF GLMKNSRDGK SYSTNLAYTP PEFLRTGRVI  300
PESVIYSYGT VLLDLLSGKH IPPSHALDLI REKNVLLLMD SSLEGQYVND DATKLVELAS  360
KCLQSEARDR GDIKFLLTVV APLQKQKEAA SHVLMGLPRN TVVVPTMLSP LGKACARMDL  420
TAVHDILLKT SYKDEEGAEN ELSFQEWTQQ VQDMLNTKKF GDIAFRDKDF KNAIEYYSKL  480
VAMMSGPSAT VFARRAFSYL MNGQAELALR DAMQAQVCIP EWPTAFYLQA LALSKLGMET  540
DAQDMLNDGA AFEAKRHNTW RYVDSVNESI SRKSFAVISR TLNVVPRGKI QHFMDSRGAC  600
KEVSDELARE LLIAISYPVP DQVRDLSFVP RDRVLVANGD GDEKYVSELM TISNVQSPDI  660
KNLKQASICN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G47655.1	2e-13	Dof family protein