PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1195850.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 514aa MW: 55511.1 Da PI: 7.4307

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1195850.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.7	3.1e-30	260	318	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r aed++++++tYeg+H h+ Pd.00g1195850.m01 260 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAsGCPVRKQVQRLAEDKTILITTYEGNHSHP 318 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 514 aa Download sequence
MEKQGRRHHI SPKLFHHSVS DCSFNASDDG LVDATNNTRL NLLTLNSGIS STSASDIHQN 60 SNNKLMTSLQ VELERLHEEN GELKTMLDQM TKSYSQLQAQ LLIAMQKQAQ NRLREPIKCE 120 ANGMLARQFM DPRPSAAAAI DHVRDPSVAY SSGKTPADHE AFSSFAPSNL NIEVMSTERD 180 QYQRRLQTNI NCAEEALDRS SQCLGSPNYT SKSSDPNLFD DDNDEPKRST DQEQVPVADQ 240 IPFRKARVSV RARSEAPMIS DGCQWRKYGQ KMAKGNPCPR AYYRCTMASG CPVRKQVQRL 300 AEDKTILITT YEGNHSHPLP PAATAMANTT SAAAAMLLSA SAPFPTITLD LTQSPMQQFH 360 RIPPPSSSTF PLPLHGYHQL MGGPGHPIPG PTYFPPNYKA PPPPAGVSLG GQRSTSTHAS 420 GMIETVSAAI ASDPNFTAAL AEAISTIMGA PRPHQGHQGG ININDGEIAN NNAARGLVAS 480 TNNSPPSANI GLPPGSLQPG SPQLPQSCTT FSTN

Sequence ? help Back to Top

Protein Sequence Length: 514 aa Download sequence

MEKQGRRHHI SPKLFHHSVS DCSFNASDDG LVDATNNTRL NLLTLNSGIS STSASDIHQN  60
SNNKLMTSLQ VELERLHEEN GELKTMLDQM TKSYSQLQAQ LLIAMQKQAQ NRLREPIKCE  120
ANGMLARQFM DPRPSAAAAI DHVRDPSVAY SSGKTPADHE AFSSFAPSNL NIEVMSTERD  180
QYQRRLQTNI NCAEEALDRS SQCLGSPNYT SKSSDPNLFD DDNDEPKRST DQEQVPVADQ  240
IPFRKARVSV RARSEAPMIS DGCQWRKYGQ KMAKGNPCPR AYYRCTMASG CPVRKQVQRL  300
AEDKTILITT YEGNHSHPLP PAATAMANTT SAAAAMLLSA SAPFPTITLD LTQSPMQQFH  360
RIPPPSSSTF PLPLHGYHQL MGGPGHPIPG PTYFPPNYKA PPPPAGVSLG GQRSTSTHAS  420
GMIETVSAAI ASDPNFTAAL AEAISTIMGA PRPHQGHQGG ININDGEIAN NNAARGLVAS  480
TNNSPPSANI GLPPGSLQPG SPQLPQSCTT FSTN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01720.1	3e-55	WRKY family protein