PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g1194240.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 280aa MW: 31659 Da PI: 7.1136 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.7 | 2.6e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTteEd llvd ++++G+g+W+ ++ g+ R++k+c++rw +yl Pd.00g1194240.m01 14 KGPWTTEEDALLVDFIQKHGTGNWRNLPKNAGLERCGKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 48.8 | 1.6e-15 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ W++Ia++++ gRt++++k+ w+++ Pd.00g1194240.m01 67 RGRFSFEEEETIIQLHSILGNK-WSAIAARLP-GRTDNEIKNCWNTH 111 89********************.*********.***********997 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 280 aa Download sequence |
MGRAPCCDKN GLKKGPWTTE EDALLVDFIQ KHGTGNWRNL PKNAGLERCG KSCRLRWTNY 60 LRPDIKRGRF SFEEEETIIQ LHSILGNKWS AIAARLPGRT DNEIKNCWNT HIRKRLLKMG 120 IDPVTHAPRI DLLDLSSILS SYMCNNPAAA LLNMSSLLSS TQQQQPLVNP ELLRLATNLL 180 SIKQENPELC SQNYNLHDQN QLCNSQQQNS QVLPPLQSHD QLQDLIQEDF SADVAKMKQL 240 MQVINEEGYS PNMTNFNCPT VSQENMIPSN LGADHQTAVL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G21440.1 | 2e-91 | MYB family protein |