PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1192890.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 780aa MW: 85964.8 Da PI: 7.2499

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1192890.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.5	1.8e-30	236	294	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ Pd.00g1192890.m01 236 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRTILITTYEGNHNHP 294 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 780 aa Download sequence
MDLHGPTDME FNVNTGLNLL LTNTSSDQSV VDDGISSNIE DKRAKSELAV LRAELERMNA 60 ENQRLRGMLN QVTTNYNALQ VHLLTLMQSQ KAEQNSSAAE GHGVFDGNNK MVVEEKKLIN 120 GNGSQVVVPR QFMDLGLAAN NADTDEPSQS SSEERSSERS GSLGENVKVA GHSDDQEKKE 180 FGRGIGREES PDQPSQSWAP NKVPRLNSPK EVDQTEATMR KARVSVRARS EAPMITDGCQ 240 WRKYGQKMAK GNPCPRAYYR CTMAAGCPVR KQVQRCAEDR TILITTYEGN HNHPLPPAAM 300 AMASTTSSAA RMLLSGSMQS ADGLMDSNFL TRTILPCSSS MATISASAPF PTVTLDLTQS 360 PNPLQLQRPP GQFNIPFPNP SQNFTNGPVS LLPQIFGQAL YNQSKFSGLQ MSQDMERAQL 420 GHQQQPGHQE QQQNSLADTS REGVNKTVSE LFKRLEISLT HELASLLFKS SDLSFLIVSV 480 FTCSFIVRSR TQKFLKMGTK LGASLVTPLL FLLLSHVVFS TTNDGLVRIG LKKMKIDQKC 540 HMNRRSNTIE QEETPGGPIR KYHLRGNLGD SEDTDIVALK NYMDAQYFGE IGIGSPAQKF 600 TVIFDTGSSN LWVPSAKCYF SVACFFHSKY KSSQSSTYTK NGKSAAIQYG TGSIAGFFSQ 660 DHVTVGNLVV KDQDFIEATK EPGITFVAAK FDGILGLGFQ EISVGNAVPV WYNLVNQGLV 720 TEPVFSFWLN RNTEGEEGGE IVFGGVDSNH YKGEHTYVPV TQKGYWQVGN PRYYHLLQIF

Sequence ? help Back to Top

Protein Sequence Length: 780 aa Download sequence

MDLHGPTDME FNVNTGLNLL LTNTSSDQSV VDDGISSNIE DKRAKSELAV LRAELERMNA  60
ENQRLRGMLN QVTTNYNALQ VHLLTLMQSQ KAEQNSSAAE GHGVFDGNNK MVVEEKKLIN  120
GNGSQVVVPR QFMDLGLAAN NADTDEPSQS SSEERSSERS GSLGENVKVA GHSDDQEKKE  180
FGRGIGREES PDQPSQSWAP NKVPRLNSPK EVDQTEATMR KARVSVRARS EAPMITDGCQ  240
WRKYGQKMAK GNPCPRAYYR CTMAAGCPVR KQVQRCAEDR TILITTYEGN HNHPLPPAAM  300
AMASTTSSAA RMLLSGSMQS ADGLMDSNFL TRTILPCSSS MATISASAPF PTVTLDLTQS  360
PNPLQLQRPP GQFNIPFPNP SQNFTNGPVS LLPQIFGQAL YNQSKFSGLQ MSQDMERAQL  420
GHQQQPGHQE QQQNSLADTS REGVNKTVSE LFKRLEISLT HELASLLFKS SDLSFLIVSV  480
FTCSFIVRSR TQKFLKMGTK LGASLVTPLL FLLLSHVVFS TTNDGLVRIG LKKMKIDQKC  540
HMNRRSNTIE QEETPGGPIR KYHLRGNLGD SEDTDIVALK NYMDAQYFGE IGIGSPAQKF  600
TVIFDTGSSN LWVPSAKCYF SVACFFHSKY KSSQSSTYTK NGKSAAIQYG TGSIAGFFSQ  660
DHVTVGNLVV KDQDFIEATK EPGITFVAAK FDGILGLGFQ EISVGNAVPV WYNLVNQGLV  720
TEPVFSFWLN RNTEGEEGGE IVFGGVDSNH YKGEHTYVPV TQKGYWQVGN PRYYHLLQIF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-112	WRKY family protein